CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra024521
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra024521
T253317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024521.1-P
MADS box
10
54
LISDNATRRVTFRKRKHGLLKKLNELTILCGLRACAIIYSDYEEG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006438
Ailuropoda melanoleuca
ENSAMEG00000006438
N
ENSBTAG00000008911
Bos taurus
ENSBTAG00000008911
N
ENSBTAG00000031523
Bos taurus
ENSBTAG00000031523
N
ENSCAFG00000016517
Canis familiaris
ENSCAFG00000016517
N
ENSCJAG00000003009
Callithrix jacchus
ENSCJAG00000003009
N
ENSCPOG00000005007
Cavia porcellus
ENSCPOG00000005007
N
ENSCSAG00000008075
Chlorocebus sabaeus
ENSCSAG00000008075
N
ENSCSAG00000019499
Chlorocebus sabaeus
ENSCSAG00000019499
N
ENSCSAG00000019500
Chlorocebus sabaeus
ENSCSAG00000019500
N
ENSDNOG00000007340
Dasypus novemcinctus
ENSDNOG00000007340
N
ENSFCAG00000005774
Felis catus
ENSFCAG00000005774
N
ENSLAFG00000017963
Loxodonta africana
ENSLAFG00000017963
N
ENSMICG00000009255
Microcebus murinus
ENSMICG00000009255
N
ENSMMUG00000004920
Macaca mulatta
ENSMMUG00000004920
N
ENSMPUG00000017379
Mustela putorius furo
ENSMPUG00000017379
N
ENSMPUG00000019780
Mustela putorius furo
ENSMPUG00000019780
N
ENSNLEG00000001066
Nomascus leucogenys
ENSNLEG00000001066
N
ENSOARG00000004624
Ovis aries
ENSOARG00000004624
N
ENSOARG00000005360
Ovis aries
ENSOARG00000005360
N
ENSOCUG00000003505
Oryctolagus cuniculus
ENSOCUG00000003505
N
ENSOGAG00000009487
Otolemur garnettii
ENSOGAG00000009487
N
ENSOGAG00000025034
Otolemur garnettii
ENSOGAG00000025034
N
ENSP00000351530
Macaca fascicularis
ENSP00000351530
N
ENSP00000351530-D2
Bos grunniens
ENSP00000351530-D2
N
ENSP00000364023
Macaca fascicularis
ENSP00000364023
N
ENSP00000364023-D1
Bos grunniens
ENSP00000364023-D1
N
ENSPANG00000000433
Papio anubis
ENSPANG00000000433
N
ENSPANG00000023784
Papio anubis
ENSPANG00000023784
N
ENSPCAG00000012425
Procavia capensis
ENSPCAG00000012425
N
ENSPPYG00000013453
Pongo abelii
ENSPPYG00000013453
N
ENSPPYG00000020407
Pongo abelii
ENSPPYG00000020407
N
ENSPPYG00000020408
Pongo abelii
ENSPPYG00000020408
N
ENSSARG00000007588
Sorex araneus
ENSSARG00000007588
N
ENSSSCG00000012359
Sus scrofa
ENSSSCG00000012359
N
ENSSTOG00000021364
Ictidomys tridecemlineatus
ENSSTOG00000021364
N
ENSTBEG00000001799
Tupaia belangeri
ENSTBEG00000001799
N
ENSTSYG00000007412
Tarsius syrichta
ENSTSYG00000007412
N
ENSTTRG00000004499
Tursiops truncatus
ENSTTRG00000004499
N
ZXDA
Macaca mulatta
ENSMMUG00000019432
N
ZXDA
Homo sapiens
ENSG00000198205
N
ZXDA
Gorilla gorilla
ENSGGOG00000024746
N
ZXDA
Pan troglodytes
ENSPTRG00000021962
N
ZXDB
Gorilla gorilla
ENSGGOG00000011651
N
ZXDB
Homo sapiens
ENSG00000198455
N
ZXDB
Pan troglodytes
ENSPTRG00000028265
N
ZXDC
Pan troglodytes
ENSPTRG00000015332
N
ZXDC
Homo sapiens
ENSG00000070476
N
ZXDC
Otolemur garnettii
ENSOGAG00000028511
N
ZXDC
Cavia porcellus
ENSCPOG00000002150
N
ZXDC
Canis familiaris
ENSCAFG00000003826
N
ZXDC
Gorilla gorilla
ENSGGOG00000009938
N
ZXDC
Oryctolagus cuniculus
ENSOCUG00000022942
N