CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g466980
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_3g466980
T254766_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH34469
MADS box
10
55
YITSDAKRKGTFKKRKNGLIKKIDEISTLCGIEACAIIFDQNDPQP
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFAF009984
Anopheles farauti
AFAF009984
N
ASTEI11547
Anopheles stephensi
ASTEI11547
N
CLEC007928
Cimex lectularius
CLEC007928
N
csin104030
Clonorchis sinensis
csin104030
N
ECPE_0001091201
Echinostoma caproni
ECPE_0001091201
N
ECPE_0001414101
Echinostoma caproni
ECPE_0001414101
N
ENSDNOG00000034905
Dasypus novemcinctus
ENSDNOG00000034905
N
ENSDNOG00000046638
Dasypus novemcinctus
ENSDNOG00000046638
N
ENSETEG00000016379
Echinops telfairi
ENSETEG00000016379
N
ENSTGUG00000006267
Taeniopygia guttata
ENSTGUG00000006267
N
Gfo_R010508
Geospiza fortis
Gfo_R010508
N
GL15829
Drosophila persimilis
FBgn0153433
N
GPLIN_000727200
Globodera pallida
GPLIN_000727200
N
HMGB1
Tupaia belangeri
ENSTBEG00000013046
N
HMGB2
Ornithorhynchus anatinus
ENSOANG00000029120
N
L596_g22130
Steinernema carpocapsae
L596_g22130
N
L892_g11245
Steinernema scapterisci
L892_g11245
N
MDOA008812
Musca domestica
MDOA008812
N
MESCA001453
Megaselia scalaris
MESCA001453
N
Ocbimv22036873m.g
Octopus bimaculoides
Ocbimv22036873m.g
N
TRE_0001071501
Trichobilharzia regenti
TRE_0001071501
N