UREG_07644 (Uncinocarpus reesii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 UREG_07644 T256735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEP82779 MADS box 10 57

Links

Other MADS box family TFs
Other Uncinocarpus reesii TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020123 Oryza indica BGIOSGA020123 N
GRMZM2G313078 Zea mays GRMZM2G313078 N
LPERR05G17730 Leersia perrieri LPERR05G17730 N
MLOC_41071 Hordeum vulgare MLOC_41071 N
OB05G29380 Oryza brachyantha OB05G29380 N
OBART05G21830 Oryza barthii OBART05G21830 N
OGLUM05G23020 Oryza glumaepatula OGLUM05G23020 N
OLONG_006513 Oryza longistaminata OLONG_006513 N
OMERI05G19700 Oryza meridionalis OMERI05G19700 N
OPUNC05G19420 Oryza punctata OPUNC05G19420 N
ORGLA05G0190100 Oryza glaberrima ORGLA05G0190100 N
OS05G0500600 Oryza sativa OS05G0500600 N
Pavir.Ca01302 Panicum virgatum Pavir.Ca01302 N
Pavir.J33892 Panicum virgatum Pavir.J33892 N
Sb09g024690 Sorghum bicolor Sb09g024690 N
Si022117m.g Setaria italica Si022117m.g N