Carubv10025699m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10025699m.g T257834_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025699m MADS box 12 63

Links

Other MADS box family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL55 Arabidopsis lyrata fgenesh2_kg.2__370__AT1G60920.1 I 0.708
AGL56 Arabidopsis lyrata fgenesh2_kg.2__374__AT1G60880.1 I 0.708
AGL97 Arabidopsis thaliana AT1G46408 N 0.729
Bo9g043470 Brassica oleracea Bo9g043470 I 0.708
Bostr.0597s0065 Boechera stricta Bostr.0597s0065 N 0.750
Bostr.10040s0123 Boechera stricta Bostr.10040s0123 I 0.729
Bostr.26959s0207 Boechera stricta Bostr.26959s0207 N 0.729
Bra027116 Brassica rapa Bra027116 I 0.729
Carubv10021715m.g Capsella rubella Carubv10021715m.g I 0.708
Carubv10021917m.g Capsella rubella Carubv10021917m.g I 0.833
Carubv10022197m.g Capsella rubella Carubv10022197m.g I 0.854
Thhalv10023813m.g Eutrema salsugineum Thhalv10023813m.g I 0.708