CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL97
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT1G46408
T252847_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G46408.1
MADS box
12
63
KIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSF
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26959s0207
Boechera stricta
Bostr.26959s0207
N
0.854
Carubv10022197m.g
Capsella rubella
Carubv10022197m.g
I
0.792
Bostr.13129s0496
Boechera stricta
Bostr.13129s0496
N
0.771
Carubv10021917m.g
Capsella rubella
Carubv10021917m.g
I
0.771
Bo6g013290
Brassica oleracea
Bo6g013290
N
0.729
Bo6g014350
Brassica oleracea
Bo6g014350
N
0.729
Bo6g018670
Brassica oleracea
Bo6g018670
N
0.729
Bra018727
Brassica rapa
Bra018727
N
0.729
Carubv10021715m.g
Capsella rubella
Carubv10021715m.g
I
0.729
Carubv10025699m.g
Capsella rubella
Carubv10025699m.g
N
0.729
AGL99
Arabidopsis thaliana
AT5G04640
N
0.708
Bostr.10040s0123
Boechera stricta
Bostr.10040s0123
I
0.708