CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.13129s0496
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.13129s0496
T257574_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13129s0496.1.p
MADS box
12
63
LIGNKDSRAVAFSKRCRGLYSKASELCLLSDAQIAIIATPVSPNSNVSFYTF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL99
Arabidopsis thaliana
AT5G04640
N
0.896
AGL97
Arabidopsis thaliana
AT1G46408
N
0.771
Bostr.26959s0207
Boechera stricta
Bostr.26959s0207
N
0.771
Carubv10022197m.g
Capsella rubella
Carubv10022197m.g
I
0.750
Bo6g013290
Brassica oleracea
Bo6g013290
N
0.708
Bo6g014350
Brassica oleracea
Bo6g014350
N
0.708
Bra018727
Brassica rapa
Bra018727
N
0.708
Carubv10021917m.g
Capsella rubella
Carubv10021917m.g
I
0.708
Thhalv10029256m.g
Eutrema salsugineum
Thhalv10029256m.g
N
0.708