evm.TU.supercontig_185.11 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_185.11 T258189_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_185.11 MADS box 10 55

Links

Other MADS box family TFs
Other Carica papaya TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011193 Calypte anna Aan_R011193 I 0.000
ACEP25258 Atta cephalotes ACEP25258 N 0.000
AFAF009298 Anopheles farauti AFAF009298 N 0.000
Alligator_sinensis_CCG006942.1 Alligator sinensis Alligator_sinensis_CCG006942.1 N 0.000
A_02404 Schistosoma haematobium A_02404 N 0.000
Cmyd_10011686 Chelonia mydas Cmyd_10011686 N 0.000
DILT_0000604501 Diphyllobothrium latum DILT_0000604501 N 0.000
ENSBTAP00000018970-D1 Bos grunniens ENSBTAP00000018970-D1 N 0.000
ENSCSAG00000005940 Chlorocebus sabaeus ENSCSAG00000005940 I 0.000
ENSMMUP00000012907 Macaca fascicularis ENSMMUP00000012907 I 0.000
ENSOARG00000016407 Ovis aries ENSOARG00000016407 N 0.000
ENSPFOG00000021683 Poecilia formosa ENSPFOG00000021683 N 0.000
ENSPPYG00000008798 Pongo abelii ENSPPYG00000008798 I 0.000
ENSPSIG00000006299 Pelodiscus sinensis ENSPSIG00000006299 N 0.000
EOMES Homo sapiens ENSG00000163508 D 0.000
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.000
HelroG77782 Helobdella robusta HelroG77782 N 0.000
HelroG89689 Helobdella robusta HelroG89689 N 0.000
HMEL002424 Heliconius melpomene HMEL002424 N 0.000
ISCW019280 Ixodes scapularis ISCW019280 N 0.000
Myotis_brandtii_Eomes_10021705 Myotis brandtii Myotis_brandtii_Eomes_10021705 N 0.000
NBR_0001696801 Nippostrongylus brasiliensis NBR_0001696801 N 0.000
Ocbimv22020340m.g Octopus bimaculoides Ocbimv22020340m.g N 0.000
PHUM322730 Pediculus humanus PHUM322730 N 0.000
SSLN_0000647101 Schistocephalus solidus SSLN_0000647101 N 0.000
TBX2 Canis familiaris ENSCAFG00000017745 I 0.000
Tbx2 Rattus norvegicus ENSRNOG00000003517 I 0.000
TBX2 Oryctolagus cuniculus ENSOCUG00000023498 I 0.000
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.000
TBX2 Felis catus ENSFCAG00000008993 N 0.000
TBX2 Callithrix jacchus ENSCJAG00000001256 I 0.000
TBX20 Sorex araneus ENSSARG00000003223 I 0.000
TBX21 Erinaceus europaeus ENSEEUG00000008994 N 0.000
Tbx4 Mus musculus ENSMUSG00000000094 D 0.000
TBX5 Erinaceus europaeus ENSEEUG00000013203 N 0.000
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.000
tbx5.S Xenopus laevis XB-GENE-6253071 N 0.000