CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R011193
(
Calypte anna
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Aan_R011193
T340976_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.689
1.000
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.689
1.000
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.689
1.000
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R011193
T-box
1
158
RRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRG
Links
Other
T-box
family TFs
Other
Calypte anna
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Tbx4
Mus musculus
ENSMUSG00000000094
D
0.898
TBX2
Callithrix jacchus
ENSCJAG00000001256
I
0.823
TBX2
Gorilla gorilla
ENSGGOG00000009144
I
0.823
ENSMMUP00000012907
Macaca fascicularis
ENSMMUP00000012907
I
0.823
ENSCSAG00000005933
Chlorocebus sabaeus
ENSCSAG00000005933
I
0.814
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.808
ENSVPAG00000011101
Vicugna pacos
ENSVPAG00000011101
I
0.802
TBX5
Erinaceus europaeus
ENSEEUG00000013203
N
0.797
tbx4.L
Xenopus laevis
XB-GENE-951383
N
0.794
ENSPSIG00000006299
Pelodiscus sinensis
ENSPSIG00000006299
N
0.793
ENSPFOG00000021683
Poecilia formosa
ENSPFOG00000021683
N
0.790
ISCW019283
Ixodes scapularis
ISCW019283
N
0.788
TBX2
Canis familiaris
ENSCAFG00000017745
I
0.781
tbx5.S
Xenopus laevis
XB-GENE-6253071
N
0.777
HelroG77782
Helobdella robusta
HelroG77782
N
0.755
TBX2
Felis catus
ENSFCAG00000008993
N
0.750
ENSOARG00000016407
Ovis aries
ENSOARG00000016407
N
0.750
ENSBTAP00000018970-D1
Bos grunniens
ENSBTAP00000018970-D1
N
0.750
A_02404
Schistosoma haematobium
A_02404
N
0.749
ENSFALG00000012218
Ficedula albicollis
ENSFALG00000012218
N
0.745
ENSMPUG00000006418
Mustela putorius furo
ENSMPUG00000006418
N
0.745
ENSMGAG00000011118
Meleagris gallopavo
ENSMGAG00000011118
N
0.744
Aan_R007630
Calypte anna
Aan_R007630
N
0.744
Afo_R015481
Aptenodytes forsteri
Afo_R015481
N
0.744
T
Myotis lucifugus
ENSMLUG00000011294
N
0.741
ENSAMEG00000008802
Ailuropoda melanoleuca
ENSAMEG00000008802
I
0.689
ENSAPLG00000008848
Anas platyrhynchos
ENSAPLG00000008848
I
0.689
TBX4
Bos taurus
ENSBTAG00000009968
I
0.689
TBX4
Canis familiaris
ENSCAFG00000017740
I
0.689
TBX4
Callithrix jacchus
ENSCJAG00000001281
I
0.689
ENSCPOG00000001044
Cavia porcellus
ENSCPOG00000001044
I
0.689
TBX4
Dasypus novemcinctus
ENSDNOG00000035197
I
0.689
TBX4
Equus caballus
ENSECAG00000024414
I
0.689
TBX4
Erinaceus europaeus
ENSEEUG00000009722
I
0.689
ENSFALG00000005474
Ficedula albicollis
ENSFALG00000005474
I
0.689
TBX4
Felis catus
ENSFCAG00000026664
I
0.689
TBX4
Homo sapiens
ENSG00000121075
D
0.689
TBX4
Loxodonta africana
ENSLAFG00000006608
I
0.689
TBX4
Meleagris gallopavo
ENSMGAG00000007617
I
0.689
TBX4
Microcebus murinus
ENSMICG00000016673
I
0.689
TBX4
Myotis lucifugus
ENSMLUG00000011682
I
0.689
TBX4
Macaca mulatta
ENSMMUG00000022580
I
0.689
ENSMPUG00000015166
Mustela putorius furo
ENSMPUG00000015166
I
0.689
ENSNLEG00000000427
Nomascus leucogenys
ENSNLEG00000000427
I
0.689
TBX4
Ornithorhynchus anatinus
ENSOANG00000011525
I
0.689
TBX4
Oryctolagus cuniculus
ENSOCUG00000010834
I
0.689
TBX4
Otolemur garnettii
ENSOGAG00000007474
I
0.689
TBX4
Ochotona princeps
ENSOPRG00000012257
I
0.689
ENSPANG00000022155
Papio anubis
ENSPANG00000022155
I
0.689
ENSPPYG00000008800
Pongo abelii
ENSPPYG00000008800
I
0.689
TBX4
Pan troglodytes
ENSPTRG00000009491
I
0.689
TBX4
Pteropus vampyrus
ENSPVAG00000016866
I
0.689
Tbx4
Rattus norvegicus
ENSRNOG00000003544
I
0.689
ENSSHAG00000012638
Sarcophilus harrisii
ENSSHAG00000012638
I
0.689
TBX4
Sus scrofa
ENSSSCG00000022980
I
0.689
ENSSTOG00000009394
Ictidomys tridecemlineatus
ENSSTOG00000009394
I
0.689
TBX4
Tursiops truncatus
ENSTTRG00000004552
I
0.689
Alligator_sinensis_CCG002049.1
Alligator sinensis
Alligator_sinensis_CCG002049.1
I
0.689
ENSP00000377435-D1
Bos grunniens
ENSP00000377435-D1
I
0.689
ENSP00000377435
Macaca fascicularis
ENSP00000377435
I
0.689