CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX2
(
Callithrix jacchus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSCJAG00000001256
T339695_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN
NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.689
1.000
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.689
1.000
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN
NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.689
1.000
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN
NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.689
1.000
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.689
1.000
TBX2
M11381_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.689
1.000
TBX2
M11382_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.689
1.000
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN
NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.689
1.000
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000002233
T-box
1
156
RRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD
ENSCJAP00000002241
T-box
1
156
RRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD
Links
Other
T-box
family TFs
Other
Callithrix jacchus
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMMUP00000012907
Macaca fascicularis
ENSMMUP00000012907
I
0.920
TBX2
Gorilla gorilla
ENSGGOG00000009144
I
0.920
ENSPFOG00000021683
Poecilia formosa
ENSPFOG00000021683
N
0.882
ENSPSIG00000006299
Pelodiscus sinensis
ENSPSIG00000006299
N
0.878
TBX2
Canis familiaris
ENSCAFG00000017745
I
0.878
ISCW019283
Ixodes scapularis
ISCW019283
N
0.861
TBX2
Felis catus
ENSFCAG00000008993
N
0.847
ENSBTAP00000018970-D1
Bos grunniens
ENSBTAP00000018970-D1
N
0.847
ENSOARG00000016407
Ovis aries
ENSOARG00000016407
N
0.847
HelroG77782
Helobdella robusta
HelroG77782
N
0.828
Aan_R011193
Calypte anna
Aan_R011193
I
0.823
TBX2
Oryctolagus cuniculus
ENSOCUG00000023498
I
0.814
ENSPPYG00000008798
Pongo abelii
ENSPPYG00000008798
I
0.814
Tbx2
Rattus norvegicus
ENSRNOG00000003517
I
0.814
ENSCSAG00000005940
Chlorocebus sabaeus
ENSCSAG00000005940
I
0.814
Tbx4
Mus musculus
ENSMUSG00000000094
D
0.801
A_02404
Schistosoma haematobium
A_02404
N
0.796
ISCW019280
Ixodes scapularis
ISCW019280
N
0.788
PHUM322730
Pediculus humanus
PHUM322730
N
0.782
DILT_0000604501
Diphyllobothrium latum
DILT_0000604501
N
0.781
SSLN_0000647101
Schistocephalus solidus
SSLN_0000647101
N
0.779
NBR_0001696801
Nippostrongylus brasiliensis
NBR_0001696801
N
0.769
HelroG89689
Helobdella robusta
HelroG89689
N
0.766
ENSFALG00000012218
Ficedula albicollis
ENSFALG00000012218
N
0.762
RPRC001899
Rhodnius prolixus
RPRC001899
N
0.762
ENSMPUG00000006418
Mustela putorius furo
ENSMPUG00000006418
N
0.762
ENSLACG00000002795
Latimeria chalumnae
ENSLACG00000002795
N
0.760
T
Myotis lucifugus
ENSMLUG00000011294
N
0.758
ENSLACG00000008854
Latimeria chalumnae
ENSLACG00000008854
N
0.752
ENSMGAG00000011118
Meleagris gallopavo
ENSMGAG00000011118
N
0.748
Afo_R015481
Aptenodytes forsteri
Afo_R015481
N
0.748
Aan_R007630
Calypte anna
Aan_R007630
N
0.748
Myotis_brandtii_T_10014749
Myotis brandtii
Myotis_brandtii_T_10014749
N
0.747
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.746
CLEC004947
Cimex lectularius
CLEC004947
N
0.743
TBX5
Erinaceus europaeus
ENSEEUG00000013203
N
0.735
ENSOANG00000020395
Ornithorhynchus anatinus
ENSOANG00000020395
I
0.638
ENSSARG00000001033
Sorex araneus
ENSSARG00000001033
I
0.394
SCUD_0001668701
Schistosoma curassoni
SCUD_0001668701
I
0.336
SMRZ_0000901601
Schistosoma margrebowiei
SMRZ_0000901601
I
0.336