CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSVPAG00000011101
(
Vicugna pacos
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSVPAG00000011101
T340599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.571
1.000
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.571
1.000
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.571
1.000
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000010338
T-box
1
117
MVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRG
Links
Other
T-box
family TFs
Other
Vicugna pacos
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tbx4.L
Xenopus laevis
XB-GENE-951383
N
0.912
tbx5.S
Xenopus laevis
XB-GENE-6253071
N
0.895
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.882
HelroG89689
Helobdella robusta
HelroG89689
N
0.826
Tbx4
Mus musculus
ENSMUSG00000000094
D
0.824
ENSMICG00000005972
Microcebus murinus
ENSMICG00000005972
I
0.811
Gfo_R006963
Geospiza fortis
Gfo_R006963
N
0.811
ENSTSYG00000004047
Tarsius syrichta
ENSTSYG00000004047
N
0.809
NBR_0001696801
Nippostrongylus brasiliensis
NBR_0001696801
N
0.807
Aan_R011193
Calypte anna
Aan_R011193
I
0.802
ISCW019280
Ixodes scapularis
ISCW019280
N
0.791
CJA37253
Caenorhabditis japonica
CJA37253
N
0.780
TBR1
Homo sapiens
ENSG00000136535
D
0.776
Aan_R005441
Calypte anna
Aan_R005441
N
0.774
Tbr1
Mus musculus
ENSMUSG00000035033
D
0.772
AMEM004106
Anopheles merus
AMEM004106
N
0.763
ENSECAG00000018160
Equus caballus
ENSECAG00000018160
N
0.761
ANCCAN_17994
Ancylostoma caninum
ANCCAN_17994
N
0.758
tbx21
Gasterosteus aculeatus
ENSGACG00000003829
N
0.756
tbx21
Oryzias latipes
ENSORLG00000012193
N
0.756
Ogr11253
Ophisaurus gracilis
Ogr11253
N
0.756
Ocbimv22013221m.g
Octopus bimaculoides
Ocbimv22013221m.g
N
0.752
ENSACAG00000011860
Anolis carolinensis
ENSACAG00000011860
N
0.744
TBR1
Callithrix jacchus
ENSCJAG00000005603
I
0.744
ENSTGUG00000006709
Taeniopygia guttata
ENSTGUG00000006709
N
0.744
Sakowv30001714m.g
Saccoglossus kowalevskii
Sakowv30001714m.g
I
0.741
ANCCAN_02907
Ancylostoma caninum
ANCCAN_02907
N
0.740
ENSMGAG00000006532
Meleagris gallopavo
ENSMGAG00000006532
N
0.739
TBX5
Vicugna pacos
ENSVPAG00000009445
I
0.739
ENSXMAG00000005990
Xiphophorus maculatus
ENSXMAG00000005990
N
0.739
ENSOANG00000028644
Ornithorhynchus anatinus
ENSOANG00000028644
N
0.736
ENSCSAG00000005933
Chlorocebus sabaeus
ENSCSAG00000005933
I
0.696
ENSAMEG00000008802
Ailuropoda melanoleuca
ENSAMEG00000008802
I
0.571
ENSAPLG00000008848
Anas platyrhynchos
ENSAPLG00000008848
I
0.571
TBX4
Bos taurus
ENSBTAG00000009968
I
0.571
TBX4
Canis familiaris
ENSCAFG00000017740
I
0.571
TBX4
Callithrix jacchus
ENSCJAG00000001281
I
0.571
ENSCPOG00000001044
Cavia porcellus
ENSCPOG00000001044
I
0.571
TBX4
Dasypus novemcinctus
ENSDNOG00000035197
I
0.571
TBX4
Equus caballus
ENSECAG00000024414
I
0.571
TBX4
Erinaceus europaeus
ENSEEUG00000009722
I
0.571
ENSFALG00000005474
Ficedula albicollis
ENSFALG00000005474
I
0.571
TBX4
Felis catus
ENSFCAG00000026664
I
0.571
TBX4
Homo sapiens
ENSG00000121075
D
0.571
TBX4
Loxodonta africana
ENSLAFG00000006608
I
0.571
TBX4
Meleagris gallopavo
ENSMGAG00000007617
I
0.571
TBX4
Microcebus murinus
ENSMICG00000016673
I
0.571
TBX4
Myotis lucifugus
ENSMLUG00000011682
I
0.571
TBX4
Macaca mulatta
ENSMMUG00000022580
I
0.571
TBX4
Monodelphis domestica
ENSMODG00000014216
I
0.571
ENSMPUG00000015166
Mustela putorius furo
ENSMPUG00000015166
I
0.571
ENSNLEG00000000427
Nomascus leucogenys
ENSNLEG00000000427
I
0.571
TBX4
Ornithorhynchus anatinus
ENSOANG00000011525
I
0.571
TBX4
Oryctolagus cuniculus
ENSOCUG00000010834
I
0.571
TBX4
Otolemur garnettii
ENSOGAG00000007474
I
0.571
TBX4
Ochotona princeps
ENSOPRG00000012257
I
0.571
ENSPANG00000022155
Papio anubis
ENSPANG00000022155
I
0.571
ENSPPYG00000008800
Pongo abelii
ENSPPYG00000008800
I
0.571
ENSPSIG00000017594
Pelodiscus sinensis
ENSPSIG00000017594
I
0.571
TBX4
Pan troglodytes
ENSPTRG00000009491
I
0.571
TBX4
Pteropus vampyrus
ENSPVAG00000016866
I
0.571
Tbx4
Rattus norvegicus
ENSRNOG00000003544
I
0.571
ENSSHAG00000012638
Sarcophilus harrisii
ENSSHAG00000012638
I
0.571
TBX4
Sus scrofa
ENSSSCG00000022980
I
0.571
ENSSTOG00000009394
Ictidomys tridecemlineatus
ENSSTOG00000009394
I
0.571
TBX4
Tursiops truncatus
ENSTTRG00000004552
I
0.571
Alligator_sinensis_CCG002049.1
Alligator sinensis
Alligator_sinensis_CCG002049.1
I
0.571
Cmyd_10016208
Chelonia mydas
Cmyd_10016208
I
0.571
ENSP00000377435-D1
Bos grunniens
ENSP00000377435-D1
I
0.571
ENSP00000377435
Macaca fascicularis
ENSP00000377435
I
0.571