CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g114785
(
Medicago truncatula
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
MTR_4g114785
T260700_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH32125
MBD
21
92
EEPVSFELPAPSGWTKKFFPKKSGTPKKNEIVFTSPTGEEIRTKRHLEKYLKTNGGPNISEFDWGTGETPRR
Links
Other
MBD
family TFs
Other
Medicago truncatula
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava13512.valid.m1
Manihot esculenta
cassava13512.valid.m1
N
0.716
cassava13513.valid.m1
Manihot esculenta
cassava13513.valid.m1
N
0.716
Ca_06682
Cicer arietinum
Ca_06682
N
0.833
chr4.CM0234.40.nc
Lotus japonicus
chr4.CM0234.40.nc
N
0.806
gene31058-v1.0-hybrid
Fragaria vesca
gene31058-v1.0-hybrid
N
0.778
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.736
GLYMA04G23980
Glycine max
GLYMA04G23980
N
0.736
GLYMA06G25310
Glycine max
GLYMA06G25310
N
0.736
GLYMA06G30350
Glycine max
GLYMA06G30350
N
0.703
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.764
GLYMA13G44230
Glycine max
GLYMA13G44230
N
0.740
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.736
MDP0000152128
Malus domestica
MDP0000152128
N
0.792
MDP0000375866
Malus domestica
MDP0000375866
N
0.792
MDP0000574053
Malus domestica
MDP0000574053
N
0.792
MTR_0339s0010
Medicago truncatula
MTR_0339s0010
N
0.750
MTR_0339s0020
Medicago truncatula
MTR_0339s0020
N
1.000
MTR_4g114770
Medicago truncatula
MTR_4g114770
N
0.986
MTR_6g060685
Medicago truncatula
MTR_6g060685
N
0.722
MTR_6g060845
Medicago truncatula
MTR_6g060845
N
0.722
MTR_6g060860
Medicago truncatula
MTR_6g060860
N
0.736
orange1.1g022412m.g
Citrus sinensis
orange1.1g022412m.g
N
0.716
PGSC0003DMG400002913
Solanum tuberosum
PGSC0003DMG400002913
N
0.736
PK04144.1
Cannabis sativa
PK04144.1
N
0.764
Pm027560
Prunus mume
Pm027560
N
0.778
POPTR_0018s12980
Populus trichocarpa
POPTR_0018s12980
N
0.707
PRUPE_ppa008789mg
Prunus persica
PRUPE_ppa008789mg
N
0.764
SapurV1A.0034s0480
Salix purpurea
SapurV1A.0034s0480
N
0.736
SapurV1A.1100s0070
Salix purpurea
SapurV1A.1100s0070
N
0.726
Solyc12g009590.1
Solanum lycopersicum
Solyc12g009590.1
N
0.736
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.708