CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1986s0008
(
Capsella grandiflora
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Cagra.1986s0008
T261447_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1986s0008.1.p
MBD
83
154
VDTAGLPTTPSGFKRILIHRIDYSKIDAYYQTPTGEKCRTLKEVEAYLSAHPEYSYALIEEFSFKVPKMMKD
Cagra.1986s0008.2.p
MBD
83
154
VDTAGLPTTPSGFKRILIHRIDYSKIDAYYQTPTGEKCRTLKEVEAYLSAHPEYSYALIEEFSFKVPKMMKD
Links
Other
MBD
family TFs
Other
Capsella grandiflora
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g080880
Brassica oleracea
Bo7g080880
N
Bostr.0556s0118
Boechera stricta
Bostr.0556s0118
N
Bra024793
Brassica rapa
Bra024793
N
Carubv10019265m.g
Capsella rubella
Carubv10019265m.g
N
MTERF1
Arabidopsis thaliana
AT2G03050
N
Thhalv10004730m.g
Eutrema salsugineum
Thhalv10004730m.g
N