CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g080880
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo7g080880
T262151_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g080880.1
mTERF
69
150
ETLLSSIGLSRPAVGRILDMFPDLLTSDPESDILPVLRFLSDEIYLSDEDIPKSITRCPRLLISSVDFQLRPALAFLKTLGF
Bo7g080880.1
mTERF
110
269
DEIYLSDEDIPKSITRCPRLLISSVDFQLRPALAFLKTLGFVGRDTVTSRNTVLLVSSVERTLIPKIEFLEEGLGFTRDEVAKMVVRSPALLTYSVENNLAPKVEFFMEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVINDET
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra024793
Brassica rapa
Bra024793
N
0.919
Cagra.0534s0010
Capsella grandiflora
Cagra.0534s0010
N
0.877
Carubv10019265m.g
Capsella rubella
Carubv10019265m.g
N
0.877
Thhalv10004730m.g
Eutrema salsugineum
Thhalv10004730m.g
N
0.873
MTERF1
Arabidopsis thaliana
AT2G03050
N
0.829
Bostr.0556s0118
Boechera stricta
Bostr.0556s0118
N
0.784