CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTERF1
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT2G03050
T262051_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G03050.1
mTERF
69
157
TLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS
AT2G03050.1
mTERF
108
269
SNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFN
AT2G03050.2
mTERF
70
158
TLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS
AT2G03050.2
mTERF
109
270
SNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFN
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10019265m.g
Capsella rubella
Carubv10019265m.g
N
0.967
Cagra.0534s0010
Capsella grandiflora
Cagra.0534s0010
N
0.967
Thhalv10004730m.g
Eutrema salsugineum
Thhalv10004730m.g
N
0.935
Bra024793
Brassica rapa
Bra024793
N
0.883
Bostr.0556s0118
Boechera stricta
Bostr.0556s0118
N
0.843
Bo7g080880
Brassica oleracea
Bo7g080880
N
0.829