Pavir.Fa00462 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.Fa00462 T265057_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00462.1.p mTERF 12 323
Pavir.Fa00462.2.p mTERF 12 323

Links

Other mTERF family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
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Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I
Bra004674 Brassica rapa Bra004674 I
Bra016891 Brassica rapa Bra016891 I
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I
Cagra.2636s0004 Capsella grandiflora Cagra.2636s0004 I
Carubv10023478m.g Capsella rubella Carubv10023478m.g I
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I
Cucsa.242790 Cucumis sativus Cucsa.242790 I
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I
F775_10743 Aegilops tauschii F775_10743 I
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I
GLYMA03G29901 Glycine max GLYMA03G29901 I
GLYMA19G32800 Glycine max GLYMA19G32800 I
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I
Lus10012020.g Linum usitatissimum Lus10012020.g I
Lus10016275.g Linum usitatissimum Lus10016275.g I
Lus10021034.g Linum usitatissimum Lus10021034.g I
Lus10023818.g Linum usitatissimum Lus10023818.g I
MDP0000297978 Malus domestica MDP0000297978 I
MTR_1g053715 Medicago truncatula MTR_1g053715 I
OBART09G14800 Oryza barthii OBART09G14800 I
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I
OMERI09G11520 Oryza meridionalis OMERI09G11520 I
ONIVA08G22610 Oryza nivara ONIVA08G22610 I
ONIVA09G15400 Oryza nivara ONIVA09G15400 I
OPUNC08G18140 Oryza punctata OPUNC08G18140 I
OPUNC09G13250 Oryza punctata OPUNC09G13250 I
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I
Pavir.J11258 Panicum virgatum Pavir.J11258 I
PK18312.1 Cannabis sativa PK18312.1 I
Pm002693 Prunus mume Pm002693 I
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I
Sb02g028420 Sorghum bicolor Sb02g028420 I
Si030195m.g Setaria italica Si030195m.g I
SPL14 Oryza sativa OS08G0509600 I
SPL9 Arabidopsis lyrata scaffold_403069.1 I
SPL9 Arabidopsis thaliana AT2G42200 D
TCM_024873 Theobroma cacao TCM_024873 I
Thhalv10016816m.g Eutrema salsugineum Thhalv10016816m.g I
TRIUR3_23872 Triticum urartu TRIUR3_23872 I
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I