CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004730m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10004730m.g
T265187_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004730m
mTERF
68
157
ENLLSSTGLSRPAVGRILDMFPDLLTSDPESDILPVLRFLSDEISISEQDIPKSISRCPRLLISSVDFQLRPALAFLKTLGFVGRDTITS
Thhalv10004730m
mTERF
109
269
DEISISEQDIPKSISRCPRLLISSVDFQLRPALAFLKTLGFVGRDTITSRNTVLLVSSVERTLIPKIEFLEEGLGFTRDEVAKMVVRSPALLTYSVENNLAPKVEFFLEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLREHGILMPLSEMLKVSDGQFN
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g080880
Brassica oleracea
Bo7g080880
N
0.873
Bostr.0556s0118
Boechera stricta
Bostr.0556s0118
N
0.910
Bra024793
Brassica rapa
Bra024793
N
0.939
Cagra.0534s0010
Capsella grandiflora
Cagra.0534s0010
N
0.947
Carubv10019265m.g
Capsella rubella
Carubv10019265m.g
N
0.947
MTERF1
Arabidopsis thaliana
AT2G03050
N
0.935