CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr6.CM0037.1460.nc
(
Lotus japonicus
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
chr6.CM0037.1460.nc
T265298_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr6.CM0037.1460.nc
mTERF
32
178
LITKPKSLLQNHPLYTPTTHAKLSLQFKEKILCLEVMGVDAGRALSQNPDLRTATMESIQSIISFLLSKGIQHKDLPRIFGMCPKILTSDIKTELNPVFDFLLHDLKVPDYNFRKVINKCPRLLTSSVRDQLKPALFYLKRLGFKDL
chr6.CM0037.1460.nc
mTERF
177
294
DLTPLAYQDSVLLVSNVERTLIPKLEYLENLGFSKGEARSLVLRCPALFTFSIENNFEPKFEYFAGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQCGINLPLSVMLKSTDEEFR
Links
Other
mTERF
family TFs
Other
Lotus japonicus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_22558
Cicer arietinum
Ca_22558
N
0.741
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
0.720
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.711
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
0.754
GLYMA09G11740
Glycine max
GLYMA09G11740
N
0.845
GLYMA15G23480
Glycine max
GLYMA15G23480
N
0.833
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.706
MDP0000233286
Malus domestica
MDP0000233286
N
0.731
mgf005485m
Mimulus guttatus
mgf005485m
N
0.711
MTR_2g049780
Medicago truncatula
MTR_2g049780
N
0.767
Pm010460
Prunus mume
Pm010460
N
0.711
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.754
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.704
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.737
TCM_029419
Theobroma cacao
TCM_029419
N
0.728
Thhalv10016991m.g
Eutrema salsugineum
Thhalv10016991m.g
N
0.703
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N
0.726