CpipJ_CPIJ004862 (Culex pipiens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 CpipJ_CPIJ004862 T265677_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myb
M03918_2.00 		Drosophila melanogaster
NRAWAACCGTTAVR
YBTAACGGTTWTYN		 SELEX
Nitta et al.(2015)
Myb_1 		0.683 0.734
Myb
M03919_2.00 		Drosophila melanogaster
YNTAACGGTHDNHH
DDNHDACCGTTANR		 SELEX
Nitta et al.(2015)
Myb_2 		0.683 0.734
Myb
M03920_2.00 		Drosophila melanogaster
NDAWWACCGTTACD
HGTAACGGTWWTHN		 SELEX
Nitta et al.(2015)
Myb_3 		0.683 0.734
Myb
M03921_2.00 		Drosophila melanogaster
DDDTDACCGTTACD
HGTAACGGTHAHHH		 SELEX
Nitta et al.(2015)
Myb_4 		0.683 0.734
Myb
M08215_2.00 		Drosophila melanogaster
MARYTGCAK
MTGCARYTK		 ChIP-seq
Contrino et al.(2012)
Mf27 		0.683 0.734
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ004862-RA Myb 19 64
CpipJ_CPIJ004862-RA Myb 70 116
CpipJ_CPIJ004862-RA Myb 122 167

Links

Other Myb/SANT family TFs
Other Culex pipiens TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla016126 Citrullus lanatus Cla016126 N 0.000
Cucsa.382200 Cucumis sativus Cucsa.382200 N 0.000
GLYMA08G01240 Glycine max GLYMA08G01240 N 0.000
MDP0000236732 Malus domestica MDP0000236732 N 0.000
MDP0000517554 Malus domestica MDP0000517554 N 0.000
MDP0000802164 Malus domestica MDP0000802164 N 0.000
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 0.000
PK01854.1 Cannabis sativa PK01854.1 N 0.000
Pm021667 Prunus mume Pm021667 N 0.000
PRUPE_ppa008471mg Prunus persica PRUPE_ppa008471mg N 0.000