GSMUA_Achr5G28940_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr5G28940_001 T272504_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.686 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P28940_001 Myb 29 78
GSMUA_Achr5P28940_001 Myb 132 179

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29625.m000702 Ricinus communis 29625.m000702 I
30055.m001548 Ricinus communis 30055.m001548 I
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I
ATBZIP27 Arabidopsis thaliana AT2G17770 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I
Carubv10023893m.g Capsella rubella Carubv10023893m.g I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava17300.m1 Manihot esculenta cassava17300.m1 I
chr2.CM0695.170.nc Lotus japonicus chr2.CM0695.170.nc I
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I
Cla009066 Citrullus lanatus Cla009066 I
Cucsa.322810 Cucumis sativus Cucsa.322810 N
F775_32479 Aegilops tauschii F775_32479 I
FD Arabidopsis lyrata Al_scaffold_0007_453 I
FD Arabidopsis thaliana AT4G35900 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I
GLYMA04G14840 Glycine max GLYMA04G14840 I
GLYMA06G47220 Glycine max GLYMA06G47220 I
Gorai.003G007000 Gossypium raimondii Gorai.003G007000 N
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
MLOC_34679 Hordeum vulgare MLOC_34679 I
OB01G46760 Oryza brachyantha OB01G46760 I
OBART01G37980 Oryza barthii OBART01G37980 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
OS01G0859300 Oryza sativa OS01G0859300 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I
PK24978.1 Cannabis sativa PK24978.1 D
Pm001315 Prunus mume Pm001315 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
SapurV1A.0016s1330 Salix purpurea SapurV1A.0016s1330 I
SapurV1A.0025s0010 Salix purpurea SapurV1A.0025s0010 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
TCM_000152 Theobroma cacao TCM_000152 I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I