GSMUA_Achr5G28940_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr5G28940_001 T272504_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.686 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P28940_001 Myb 29 78
GSMUA_Achr5P28940_001 Myb 132 179

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr8G02380_001 Musa acuminata GSMUA_Achr8G02380_001 I 0.814
GSMUA_Achr10G00660_001 Musa acuminata GSMUA_Achr10G00660_001 I 0.810
28288.m000014 Ricinus communis 28288.m000014 I 0.690
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.690
PK27693.1 Cannabis sativa PK27693.1 D 0.686
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.680
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.676
TCM_041672 Theobroma cacao TCM_041672 I 0.675
29681.m001296 Ricinus communis 29681.m001296 I 0.675
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.675
Cla004397 Citrullus lanatus Cla004397 I 0.672
TCM_021750 Theobroma cacao TCM_021750 I 0.666
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.666
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.666
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.665
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.664
Pm000529 Prunus mume Pm000529 I 0.664
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.663
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.663
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.662
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.661
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.661
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.661
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.661