GSMUA_Achr6G06490_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr6G06490_001 T272519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.692 0.838
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.692 0.838
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P06490_001 Myb 89 122
GSMUA_Achr6P06490_001 Myb 128 173

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28650.m000191 Ricinus communis 28650.m000191 N 0.000
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.000
Ca_16678 Cicer arietinum Ca_16678 N 0.000
evm.TU.supercontig_81.123 Carica papaya evm.TU.supercontig_81.123 N 0.000
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.000
GLYMA11G14750 Glycine max GLYMA11G14750 N 0.000
GLYMA12G06670 Glycine max GLYMA12G06670 N 0.000
Gorai.001G111500 Gossypium raimondii Gorai.001G111500 N 0.000
Gorai.003G130600 Gossypium raimondii Gorai.003G130600 N 0.000
Pm000719 Prunus mume Pm000719 N 0.000
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.000
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.000
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.000
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.000
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.000
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.000
TCM_041815 Theobroma cacao TCM_041815 N 0.000