CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ONIVA01G10670 *(Oryza nivara)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	ONIVA01G10670	T276192_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	0.757	0.842
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.748	0.791
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.748	0.791
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.726	0.835
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.710	0.784
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ONIVA01G10670.1	Myb	51	97	KGNWTPEEDAILSRAVQTYNGKNWKKIAECFPDRTDVQCLHRWQKVL
ONIVA01G10670.1	Myb	103	149	KGPWSKEEDEIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWYNHL
ONIVA01G10670.1	Myb	155	199	KEAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
ONIVA01G10670.2	Myb	38	79	PKEIGPLKRAVQTYNGKNWKKIAECFPDRTDVQCLHRWQKVL
ONIVA01G10670.2	Myb	85	131	KGPWSKEEDEIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWYNHL
ONIVA01G10670.2	Myb	137	181	KEAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS

Links
Other Myb/SANT family TFs
Other *Oryza nivara* TFs