ORGLA05G0109400 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA05G0109400 T276731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.687 0.753
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.687 0.753
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.687 0.753
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.672 0.753
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.672 0.753
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.672 0.753
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.672 0.753
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.672 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0109400.1 Myb 20 66
ORGLA05G0109400.1 Myb 72 117

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29625.m000702 Ricinus communis 29625.m000702 I
29955.m001177 Ricinus communis 29955.m001177 I
30055.m001548 Ricinus communis 30055.m001548 I
30226.m002055 Ricinus communis 30226.m002055 I
ABI5 Arabidopsis thaliana AT2G36270 D
ABI5 Populus trichocarpa POPTR_0006s08300 I
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00152p00081700 Amborella trichopoda AMTR_s00152p00081700 I
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
AREB3 Arabidopsis lyrata scaffold_502836.1 I
ATBZIP27 Arabidopsis thaliana AT2G17770 I
BGIOSGA000613 Oryza indica BGIOSGA000613 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
BGIOSGA010835 Oryza indica BGIOSGA010835 I
BGIOSGA020087 Oryza indica BGIOSGA020087 I
BGIOSGA026419 Oryza indica BGIOSGA026419 I
Bo4g012940 Brassica oleracea Bo4g012940 I
Bo4g112690 Brassica oleracea Bo4g112690 I
Bo6g072380 Brassica oleracea Bo6g072380 I
Bo8g091160 Brassica oleracea Bo8g091160 I
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I
Bra003253 Brassica rapa Bra003253 I
Bra007274 Brassica rapa Bra007274 I
Bra007276 Brassica rapa Bra007276 I
Bra014668 Brassica rapa Bra014668 I
Bra016953 Brassica rapa Bra016953 I
BRADI1G17335 Brachypodium distachyon BRADI1G17335 I
BRADI1G63840 Brachypodium distachyon BRADI1G63840 I
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I
Carubv10018770m.g Capsella rubella Carubv10018770m.g I
Carubv10023893m.g Capsella rubella Carubv10023893m.g I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava17300.m1 Manihot esculenta cassava17300.m1 I
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I
Ca_08143 Cicer arietinum Ca_08143 I
Ca_15706 Cicer arietinum Ca_15706 I
Ca_23748 Cicer arietinum Ca_23748 I
chr2.CM0695.170.nc Lotus japonicus chr2.CM0695.170.nc I
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I
Cla000389 Citrullus lanatus Cla000389 I
Cla009066 Citrullus lanatus Cla009066 I
Cla013878 Citrullus lanatus Cla013878 I
Cla014026 Citrullus lanatus Cla014026 N
Cucsa.184670 Cucumis sativus Cucsa.184670 I
Cucsa.364380 Cucumis sativus Cucsa.364380 I
Cucsa.385090 Cucumis sativus Cucsa.385090 I
DPBF2 Vitis vinifera VIT_06s0080g00340 I
DPBF3 Arabidopsis thaliana AT3G56850 D
EEL Arabidopsis thaliana AT2G41070 I
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I
F775_17024 Aegilops tauschii F775_17024 I
F775_28711 Aegilops tauschii F775_28711 I
F775_31964 Aegilops tauschii F775_31964 I
F775_32479 Aegilops tauschii F775_32479 I
F775_43558 Aegilops tauschii F775_43558 I
FD Arabidopsis lyrata Al_scaffold_0007_453 I
FD Arabidopsis thaliana AT4G35900 I
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I
GLYMA03G00580 Glycine max GLYMA03G00580 I
GLYMA04G14840 Glycine max GLYMA04G14840 I
GLYMA05G25200 Glycine max GLYMA05G25200 I
GLYMA06G47220 Glycine max GLYMA06G47220 I
GLYMA08G24340 Glycine max GLYMA08G24340 I
GLYMA10G08370 Glycine max GLYMA10G08370 I
GLYMA13G22061 Glycine max GLYMA13G22061 I
GLYMA15G35080 Glycine max GLYMA15G35080 I
GLYMA19G30230 Glycine max GLYMA19G30230 I
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I
GRMZM2G077124 Zea mays GRMZM2G077124 I
GRMZM2G159134 Zea mays GRMZM2G159134 I
GRMZM2G161009 Zea mays GRMZM2G161009 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I
LjSGA_023611.1 Lotus japonicus LjSGA_023611.1 I
LPERR01G30010 Leersia perrieri LPERR01G30010 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
LPERR05G16840 Leersia perrieri LPERR05G16840 I
Lus10008927.g Linum usitatissimum Lus10008927.g I
Lus10009755.g Linum usitatissimum Lus10009755.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10017049.g Linum usitatissimum Lus10017049.g I
Lus10021369.g Linum usitatissimum Lus10021369.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10028889.g Linum usitatissimum Lus10028889.g I
MDP0000198495 Malus domestica MDP0000198495 I
MDP0000215106 Malus domestica MDP0000215106 I
MDP0000273211 Malus domestica MDP0000273211 I
MDP0000706379 Malus domestica MDP0000706379 I
MDP0000740787 Malus domestica MDP0000740787 I
mgf002556m Mimulus guttatus mgf002556m I
mgf011003m Mimulus guttatus mgf011003m I
MLOC_16096 Hordeum vulgare MLOC_16096 I
MLOC_34679 Hordeum vulgare MLOC_34679 I
MLOC_4554 Hordeum vulgare MLOC_4554 I
MLOC_61490 Hordeum vulgare MLOC_61490 I
MLOC_6534 Hordeum vulgare MLOC_6534 I
MTR_3g010660 Medicago truncatula MTR_3g010660 I
MTR_7g088090 Medicago truncatula MTR_7g088090 I
MTR_8g043960 Medicago truncatula MTR_8g043960 I
OB01G43630 Oryza brachyantha OB01G43630 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB05G28440 Oryza brachyantha OB05G28440 I
OB07G32300 Oryza brachyantha OB07G32300 I
OBART01G34790 Oryza barthii OBART01G34790 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART05G21000 Oryza barthii OBART05G21000 I
OBART07G26790 Oryza barthii OBART07G26790 I
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I
OLONG_002030 Oryza longistaminata OLONG_002030 I
OLONG_003399 Oryza longistaminata OLONG_003399 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G32080 Oryza meridionalis OMERI01G32080 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
OMERI03G14020 Oryza meridionalis OMERI03G14020 I
OMERI05G18990 Oryza meridionalis OMERI05G18990 I
OMERI07G23410 Oryza meridionalis OMERI07G23410 I
ONIVA01G39770 Oryza nivara ONIVA01G39770 I
ONIVA03G16560 Oryza nivara ONIVA03G16560 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA05G21710 Oryza nivara ONIVA05G21710 I
ONIVA07G26520 Oryza nivara ONIVA07G26520 I
OPUNC01G33790 Oryza punctata OPUNC01G33790 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC07G25180 Oryza punctata OPUNC07G25180 I
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I
OS01G0813100 Oryza sativa OS01G0813100 I
OS01G0859300 Oryza sativa OS01G0859300 I
OS03G0322700 Oryza sativa OS03G0322700 I
OS05G0489700 Oryza sativa OS05G0489700 I
OS07G0686100 Oryza sativa OS07G0686100 I
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I
Pavir.J05672 Panicum virgatum Pavir.J05672 I
Pavir.J34085 Panicum virgatum Pavir.J34085 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
Pavir.J38875 Panicum virgatum Pavir.J38875 I
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I
PK16522.1 Cannabis sativa PK16522.1 N
PK24978.1 Cannabis sativa PK24978.1 D
Pm001315 Prunus mume Pm001315 I
Pm004043 Prunus mume Pm004043 I
Pm016826 Prunus mume Pm016826 I
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
Sb01g036810 Sorghum bicolor Sb01g036810 I
Sb02g043620 Sorghum bicolor Sb02g043620 I
Sb03g037740 Sorghum bicolor Sb03g037740 I
Sb03g040510 Sorghum bicolor Sb03g040510 I
Sb09g023920 Sorghum bicolor Sb09g023920 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si001731m.g Setaria italica Si001731m.g I
Si002173m.g Setaria italica Si002173m.g I
Si022639m.g Setaria italica Si022639m.g I
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I
TCM_000152 Theobroma cacao TCM_000152 I
TCM_006432 Theobroma cacao TCM_006432 I
TCM_044596 Theobroma cacao TCM_044596 I
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I
TRIUR3_06726 Triticum urartu TRIUR3_06726 I
TRIUR3_12792 Triticum urartu TRIUR3_12792 I
TRIUR3_15490 Triticum urartu TRIUR3_15490 I
TRIUR3_21253 Triticum urartu TRIUR3_21253 I
TRIUR3_24203 Triticum urartu TRIUR3_24203 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I