PGSC0003DMG400003055 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400003055 T277532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.830 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400007899 Myb 55 114
PGSC0003DMT400007899 Myb 120 166
PGSC0003DMT400007899 Myb 172 217

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra003405 Brassica rapa Bra003405 I 0.000
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I 0.000
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I 0.000
Cucsa.159750 Cucumis sativus Cucsa.159750 I 0.000
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I 0.000
GLYMA04G02860 Glycine max GLYMA04G02860 I 0.000
GLYMA06G02880 Glycine max GLYMA06G02880 I 0.000
mgf005948m Mimulus guttatus mgf005948m N 0.000
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I 0.000
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I 0.000
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I 0.000
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I 0.000