PGSC0003DMG400003055 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400003055 T277532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.830 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400007899 Myb 55 114
PGSC0003DMT400007899 Myb 120 166
PGSC0003DMT400007899 Myb 172 217

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g080580.2 Solanum lycopersicum Solyc08g080580.2 I 0.872
Q948S4_TOBAC Nicotiana tabacum Q948S4_TOBAC D 0.830
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.706
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.691
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.681
TCM_047091 Theobroma cacao TCM_047091 I 0.676
Pm005124 Prunus mume Pm005124 I 0.670
MDP0000179225 Malus domestica MDP0000179225 I 0.670
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.668
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.668
TCM_016203 Theobroma cacao TCM_016203 I 0.667
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.664
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.664
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.663
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.662
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.662
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.661