TCM_016203 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_016203 T280510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.676 0.743
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY24659 Myb 54 100
EOY24659 Myb 106 152
EOY24659 Myb 158 203
EOY24660 Myb 6 45
EOY24660 Myb 51 97
EOY24660 Myb 103 148

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.003G160500 Gossypium raimondii Gorai.003G160500 N 0.780
Solyc08g080580.2 Solanum lycopersicum Solyc08g080580.2 I 0.679
Q948S4_TOBAC Nicotiana tabacum Q948S4_TOBAC D 0.676
PGSC0003DMG400003055 Solanum tuberosum PGSC0003DMG400003055 I 0.667