Si002467m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si002467m.g T279699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.786 0.957
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.753 0.766
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.715 0.745
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.715 0.745
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.706 0.787
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.706 0.723
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.665 0.766
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.665 0.766
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.665 0.766
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.665 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si002467m Myb 5 57

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006306 Ricinus communis 30169.m006306 N
cassava20476.m1 Manihot esculenta cassava20476.m1 N
evm.TU.supercontig_34.30 Carica papaya evm.TU.supercontig_34.30 N
gene18499-v1.0-hybrid Fragaria vesca gene18499-v1.0-hybrid N
GLYMA15G28410 Glycine max GLYMA15G28410 N
Gorai.002G110100 Gossypium raimondii Gorai.002G110100 N
LjSGA_122341.1 Lotus japonicus LjSGA_122341.1 N
MTR_8g442410 Medicago truncatula MTR_8g442410 N
PK21020.1 Cannabis sativa PK21020.1 N
Pm011106 Prunus mume Pm011106 N
PRUPE_ppa004256mg Prunus persica PRUPE_ppa004256mg N
TCM_033446 Theobroma cacao TCM_033446 N