Ca_19427 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_19427 T283087_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.673 0.785
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.673 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19427 Myb 166 212
Ca_19427 Myb 218 263

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL105 Arabidopsis thaliana AT5G37415 I 0.000
AGL43 Arabidopsis thaliana AT5G40220 I 0.000
AGL75 Arabidopsis thaliana AT5G41200 I 0.000
AGL76 Arabidopsis thaliana AT5G40120 I 0.000
AGL77 Arabidopsis thaliana AT5G38740 I 0.000
AGL81 Arabidopsis thaliana AT5G39750 I 0.000
AGL98 Arabidopsis thaliana AT5G39810 I 0.000
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.000
Bo4g139260 Brassica oleracea Bo4g139260 I 0.000
Bo4g139560 Brassica oleracea Bo4g139560 N 0.000
Bo4g139620 Brassica oleracea Bo4g139620 N 0.000
Bra025607 Brassica rapa Bra025607 N 0.000
Bra025609 Brassica rapa Bra025609 I 0.000
Bra025619 Brassica rapa Bra025619 N 0.000
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.000
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.000
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.000
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.000