Cla022565 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla022565 T283335_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.854 0.957
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.813 0.885
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.813 0.885
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.806 0.899
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.798 0.921
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.684 0.755
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.680 0.813
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022565 Myb 38 84
Cla022565 Myb 90 136
Cla022565 Myb 142 186

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000447 Ailuropoda melanoleuca ENSAMEG00000000447 N
ENSBTAG00000010252 Bos taurus ENSBTAG00000010252 N
ENSCSAG00000017904 Chlorocebus sabaeus ENSCSAG00000017904 N
ENSLAFG00000018574 Loxodonta africana ENSLAFG00000018574 N
ENSMLUG00000016482 Myotis lucifugus ENSMLUG00000016482 N
ENSMPUG00000001181 Mustela putorius furo ENSMPUG00000001181 N
ENSNLEG00000006278 Nomascus leucogenys ENSNLEG00000006278 N
ENSP00000331577 Macaca fascicularis ENSP00000331577 N
ENSPANG00000006799 Papio anubis ENSPANG00000006799 N
ENSSARG00000012675 Sorex araneus ENSSARG00000012675 N
ENSSSCG00000003739 Sus scrofa ENSSSCG00000003739 N
ENSSTOG00000023511 Ictidomys tridecemlineatus ENSSTOG00000023511 N
Myotis_brandtii_ZNF397_10017291 Myotis brandtii Myotis_brandtii_ZNF397_10017291 N
Zfp397 Mus musculus ENSMUSG00000024276 N
Zfp397 Rattus norvegicus ENSRNOG00000048101 N
Zfp397 Dipodomys ordii ENSDORG00000009608 N
ZNF397 Macaca mulatta ENSMMUG00000020530 N
ZNF397 Oryctolagus cuniculus ENSOCUG00000007099 N
ZNF397 Otolemur garnettii ENSOGAG00000029778 N
ZNF397 Homo sapiens ENSG00000186812 N
ZNF397 Pteropus vampyrus ENSPVAG00000017450 N
ZNF397 Felis catus ENSFCAG00000023533 N
ZNF397 Equus caballus ENSECAG00000015789 N
ZNF397 Tupaia belangeri ENSTBEG00000014907 N
ZNF397 Tursiops truncatus ENSTTRG00000013486 N
ZNF397 Callithrix jacchus ENSCJAG00000021000 N
ZNF397 Canis familiaris ENSCAFG00000017918 N