CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Q948S5_TOBAC *(Nicotiana tabacum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Q948S5_TOBAC	T283697_2.00	HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.828	0.885
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.828	0.885
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.797	0.928
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.783	0.871
Q948S6_TOBAC M11075_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA1_01	0.701	0.827
Q948S4_TOBAC M11073_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBB_01	0.683	0.748
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Q948S5_TOBAC	Myb	36	82	KGQWTTEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVL
Q948S5_TOBAC	Myb	88	134	KGPWSKEEDEVIVELVKKYGPKKWSTIAQHLPGRIGKQCRERWHNHL
Q948S5_TOBAC	Myb	140	184	KEAWTQEEELTLIRAHQIYGNKWAELTKYLPGRTDNAIKNHWNSS

Links
Other Myb/SANT family TFs
Other *Nicotiana tabacum* TFs