Cucsa.165230 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.165230 T284449_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.841 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.957
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.841 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.823 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.165230.1 Myb 618 668
Cucsa.165230.2 Myb 585 635
Cucsa.165230.3 Myb 584 634
Cucsa.165230.4 Myb 584 634

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.000
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.000
BGIOSGA028020 Oryza indica BGIOSGA028020 N 0.000
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.000
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.000
BRADI3G16500 Brachypodium distachyon BRADI3G16500 N 0.000
Cla006845 Citrullus lanatus Cla006845 I 0.000
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.000
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.000
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.000
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.000
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.000
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.000
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.000
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.000
GRMZM2G180168 Zea mays GRMZM2G180168 N 0.000
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.000
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.000
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.000
LPERR08G03490 Leersia perrieri LPERR08G03490 N 0.000
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.000
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.000
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.000
OB02G35380 Oryza brachyantha OB02G35380 I 0.000
OB03G11610 Oryza brachyantha OB03G11610 N 0.000
OB10G24100 Oryza brachyantha OB10G24100 N 0.000
OBART02G28100 Oryza barthii OBART02G28100 N 0.000
OBART03G01650 Oryza barthii OBART03G01650 N 0.000
OBART10G17010 Oryza barthii OBART10G17010 N 0.000
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.000
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.000
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N 0.000
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.000
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.000
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.000
OMERI08G03480 Oryza meridionalis OMERI08G03480 N 0.000
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.000
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.000
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.000
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.000
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.000
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.000
OPUNC08G03290 Oryza punctata OPUNC08G03290 N 0.000
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.000
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.000
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.000
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N 0.000
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.000
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.000
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N 0.000
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.000
OS02G0683500 Oryza sativa OS02G0683500 N 0.000
OS03G0120900 Oryza sativa OS03G0120900 N 0.000
OS08G0157700 Oryza sativa OS08G0157700 N 0.000
OS10G0537100 Oryza sativa OS10G0537100 N 0.000
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.000
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.000
Pavir.Fb00403 Panicum virgatum Pavir.Fb00403 N 0.000
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.000
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.000
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.000
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.000
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.000
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.000
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.000
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.000
Sb07g003880 Sorghum bicolor Sb07g003880 N 0.000
Si011823m.g Setaria italica Si011823m.g N 0.000
Si014362m.g Setaria italica Si014362m.g N 0.000
Si020241m.g Setaria italica Si020241m.g N 0.000
Si036864m.g Setaria italica Si036864m.g N 0.000
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N 0.000
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.000
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.000
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.000
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.000