Bostr.25993s0083 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.25993s0083 T285796_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.891 0.978
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.891 0.978
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.845 0.870
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.818 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.818 0.848
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.726 0.717
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.726 0.717
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.726 0.717
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.726 0.717
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.726 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.720 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.720 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.720 0.783
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.712 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0083.1.p Myb 24 69

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011231 Aedes aegypti AAEL011231 I
AALB007603 Anopheles albimanus AALB007603 I
AARA005929 Anopheles arabiensis AARA005929 I
AATE013762 Anopheles atroparvus AATE013762 I
ACEP12797 Atta cephalotes ACEP12797 I
ACEP13260 Atta cephalotes ACEP13260 I
ACUA011505 Anopheles culicifacies ACUA011505 I
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I
ADIR005732 Anopheles dirus ADIR005732 I
AEPI004043 Anopheles epiroticus AEPI004043 I
AFAF014433 Anopheles farauti AFAF014433 I
AFUN003486 Anopheles funestus AFUN003486 I
AGAP010438 Anopheles gambiae AGAP010438 D
AGAP028221 Anopheles gambiae AGAP028221 I
AMEM014965 Anopheles merus AMEM014965 I
AMIN004996 Anopheles minimus AMIN004996 I
AQUA005997 Anopheles quadriannulatus AQUA005997 I
ASIS019127 Anopheles sinensis ASIS019127 I
A_05482 Schistosoma haematobium A_05482 I
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I
CLEC007515 Cimex lectularius CLEC007515 I
CLEC025065 Cimex lectularius CLEC025065 I
csin104466 Clonorchis sinensis csin104466 I
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I
DILT_0000083601 Diphyllobothrium latum DILT_0000083601 N
eg Drosophila melanogaster FBgn0000560 D
GA18381 Drosophila pseudoobscura FBgn0078384 I
GA18413 Drosophila pseudoobscura FBgn0078415 I
GA20312 Drosophila pseudoobscura FBgn0080307 I
GB48727 Apis mellifera GB48727 I
GB51231 Apis mellifera GB51231 I
GB52331 Apis mellifera GB52331 I
GD12173 Drosophila simulans FBgn0183909 I
GD15001 Drosophila simulans FBgn0186673 I
GE19793 Drosophila yakuba FBgn0237126 I
GE22389 Drosophila yakuba FBgn0239612 I
GE22392 Drosophila yakuba FBgn0239615 I
GE23274 Drosophila yakuba FBgn0240471 I
GF24121 Drosophila ananassae FBgn0101115 I
GF24122 Drosophila ananassae FBgn0101116 I
GF25170 Drosophila ananassae FBgn0102162 I
GG13292 Drosophila erecta FBgn0105564 I
GG13294 Drosophila erecta FBgn0105566 I
GG16225 Drosophila erecta FBgn0108460 I
GH16373 Drosophila grimshawi FBgn0123844 I
GH16981 Drosophila grimshawi FBgn0124452 I
GH16982 Drosophila grimshawi FBgn0124453 I
GI11566 Drosophila mojavensis FBgn0134326 I
GI11896 Drosophila mojavensis FBgn0134654 I
GI11900 Drosophila mojavensis FBgn0134658 I
GJ11245 Drosophila virilis FBgn0198506 I
GJ13774 Drosophila virilis FBgn0200993 I
GK10545 Drosophila willistoni FBgn0212560 I
GK10566 Drosophila willistoni FBgn0212581 I
GK17344 Drosophila willistoni FBgn0219343 I
GL12762 Drosophila persimilis FBgn0150368 I
GL12764 Drosophila persimilis FBgn0150370 I
GL24862 Drosophila persimilis FBgn0162450 I
GM22199 Drosophila sechellia FBgn0177069 I
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I
HHAL001315-PA Halyomorpha halys HHAL001315-PA I
HMEL010451 Heliconius melpomene HMEL010451 I
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I
KGM_10290 Danaus plexippus KGM_10290 I
KGM_21348 Danaus plexippus KGM_21348 I
kni Drosophila melanogaster FBgn0001320 D
kni Drosophila virilis FBgn0013118 I
kni Drosophila simulans FBgn0044187 I
kni Drosophila sechellia FBgn0044208 I
knrl Drosophila melanogaster FBgn0001323 D
L798_11128 Zootermopsis nevadensis L798_11128 I
LCUP004919 Lucilia cuprina LCUP004919 I
LCUP004920 Lucilia cuprina LCUP004920 I
LCUP004922 Lucilia cuprina LCUP004922 I
LDEC003050 Leptinotarsa decemlineata LDEC003050 I
MDOA002495 Musca domestica MDOA002495 I
MDOA008593 Musca domestica MDOA008593 I
MDOA012160 Musca domestica MDOA012160 I
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I
NV16468 Nasonia vitripennis NV16468 I
PHUM468660 Pediculus humanus PHUM468660 I
PHUM470190 Pediculus humanus PHUM470190 I
PPAI002202 Phlebotomus papatasi PPAI002202 I
RPRC003216 Rhodnius prolixus RPRC003216 I
SINV19432 Solenopsis invicta SINV19432 I
SINV19531 Solenopsis invicta SINV19531 I
SMAR012614 Strigamia maritima SMAR012614 I
SMTD_0001266401 Schistosoma mattheei SMTD_0001266401 I
SPER_0001282801 Spirometra erinaceieuropaei SPER_0001282801 N
SSLN_0000865601 Schistocephalus solidus SSLN_0000865601 N
SVE_0532500 Strongyloides venezuelensis SVE_0532500 I
T265_13094 Opisthorchis viverrini T265_13094 I
TC003409 Tribolium castaneum TC003409 I
TC003413 Tribolium castaneum TC003413 I
tetur34g00430 Tetranychus urticae tetur34g00430 I
TRE_0000379501 Trichobilharzia regenti TRE_0000379501 I