Bostr.2902s0392 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.2902s0392 T285841_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.909 1.000
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.909 1.000
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.875 0.957
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.875 0.957
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.821 0.915
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2902s0392.1.p Myb 228 279

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_02619 Ancylostoma duodenale ANCDUO_02619 N
ASU_06962 Ascaris suum ASU_06962 N
Bm7459 Brugia malayi Bm7459 N
BTMF_0000953701 Brugia timori BTMF_0000953701 N
BXY_1512700 Bursaphelenchus xylophilus BXY_1512700 N
CBG06922 Caenorhabditis briggsae CBG06922 N
CRE15772 Caenorhabditis remanei CRE15772 N
DME_0000390001 Dracunculus medinensis DME_0000390001 N
EEL_0000068901 Elaeophora elaphi EEL_0000068901 N
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I
HCOI00251100 Haemonchus contortus HCOI00251100 N
HCOI01543700 Haemonchus contortus HCOI01543700 N
L596_g26009 Steinernema carpocapsae L596_g26009 N
L892_g4529 Steinernema scapterisci L892_g4529 N
L893_g15060 Steinernema glaseri L893_g15060 N
L898_g14583 Steinernema monticolum L898_g14583 N
LOAG_01471 Loa loa LOAG_01471 N
maker-nMf.1.1.scaf00076-augustus-gene-0.21 Meloidogyne floridensis maker-nMf.1.1.scaf00076-augustus-gene-0.21 N
Minc06478 Meloidogyne incognita Minc06478 N
nAv.1.0.1.g05112 Acanthocheilonema viteae nAv.1.0.1.g05112 N
NBR_0000271401 Nippostrongylus brasiliensis NBR_0000271401 N
NBR_0000522801 Nippostrongylus brasiliensis NBR_0000522801 I
nLs.2.1.2.g02003 Litomosoides sigmodontis nLs.2.1.2.g02003 N
nOo.2.0.1.g00974 Onchocerca ochengi nOo.2.0.1.g00974 N
OFLC_0000052301 Onchocerca flexuosa OFLC_0000052301 N
Ppa-sma-2 Pristionchus pacificus PPA15247 N
PTRK_0000297300 Parastrongyloides trichosuri PTRK_0000297300 N
RSKR_0000082500 Rhabditophanes kr3021 RSKR_0000082500 N
sma-2 Caenorhabditis elegans WBGene00004856 N
SMUV_0000477801 Syphacia muris SMUV_0000477801 N
SPAL_0001290200 Strongyloides papillosus SPAL_0001290200 N
SSTP_0000571600 Strongyloides stercoralis SSTP_0000571600 N
SVE_0161800 Strongyloides venezuelensis SVE_0161800 N
TCLT_0000791701 Thelazia callipaeda TCLT_0000791701 N
TMUE_s0173000400 Trichuris muris TMUE_s0173000400 I
WBGene00245189 Onchocerca volvulus WBGene00245189 N
WUBG_02400 Wuchereria bancrofti WUBG_02400 N