Gorai.001G233800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G233800 T287477_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G233800.1 Myb 1109 1161
Gorai.001G233800.2 Myb 1107 1159
Gorai.001G233800.3 Myb 1107 1159
Gorai.001G233800.4 Myb 1108 1160
Gorai.001G233800.5 Myb 1107 1159
Gorai.001G233800.6 Myb 1107 1159
Gorai.001G233800.7 Myb 1093 1145

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N 0.769
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.727
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.735
Bo3g083740 Brassica oleracea Bo3g083740 N 0.665
Bo7g031610 Brassica oleracea Bo7g031610 N 0.697
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.718
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.705
Bra013238 Brassica rapa Bra013238 N 0.665
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.672
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.782
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.761
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.732
Cla015187 Citrullus lanatus Cla015187 N 0.771
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.771
EAF1A Arabidopsis thaliana AT3G24880 N 0.697
EAF1B Arabidopsis thaliana AT3G24870 N 0.697
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.742
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.752
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.742
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.718
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.782
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.769
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.782
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.769
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.772
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.751
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.742
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.782
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.724
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.755
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.749
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.749
MDP0000155726 Malus domestica MDP0000155726 N 0.782
MDP0000250529 Malus domestica MDP0000250529 N 0.782
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.780
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.732
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.702
PK23540.1 Cannabis sativa PK23540.1 N 0.742
Pm020347 Prunus mume Pm020347 N 0.780
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.761
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.796
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.780
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.761
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.782
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.737
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.735
TCM_002924 Theobroma cacao TCM_002924 N 0.789
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.718