CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MDP0000179225 *(Malus domestica)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	MDP0000179225	T288367_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	0.847	0.950
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.835	0.957
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.811	0.885
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.811	0.885
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.761	0.849
Q948S6_TOBAC M11075_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA1_01	0.704	0.842
MYB3R5 M07116_2.00	Arabidopsis thaliana	NWWWWNTDRCCGTTR	YAACGGYHANWWWWN	Dap-seq OMalley et al.(2016) MYB3R5_col_a	0.699	0.799
Q948S4_TOBAC M11073_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBB_01	0.673	0.748
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
MDP0000179225	Myb	37	83	KGQWTPEEDEILRRAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVL
MDP0000179225	Myb	89	135	KGPWSKEEDDVIIELVKKYGPKKWSTIAQHLPGRIGKQCRERWHNHL
MDP0000179225	Myb	141	185	KEAWTQEEELALIRAHQMYGNKWAELTKFLPGRTDNAIKNHWNSS

Links
Other Myb/SANT family TFs
Other *Malus domestica* TFs

178 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA011095	Oryza indica	BGIOSGA011095	N	0.000
OB03G21040	Oryza brachyantha	OB03G21040	N	0.000
OBART03G10890	Oryza barthii	OBART03G10890	N	0.000
OLONG_015766	Oryza longistaminata	OLONG_015766	N	0.000
OMERI03G10160	Oryza meridionalis	OMERI03G10160	N	0.000
OPUNC03G10480	Oryza punctata	OPUNC03G10480	N	0.000
ORGLA03G0104600	Oryza glaberrima	ORGLA03G0104600	N	0.000
ORUFI03G11130	Oryza rufipogon	ORUFI03G11130	N	0.000