Pavir.Ib00832 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ib00832 T289277_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib00832.1.p Myb 178 227

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I 0.000
29912.m005354 Ricinus communis 29912.m005354 I 0.000
29983.m003125 Ricinus communis 29983.m003125 I 0.000
30190.m010767 Ricinus communis 30190.m010767 I 0.000
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.000
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.000
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.000
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.000
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N 0.000
anac044 Arabidopsis thaliana AT3G01600 N 0.000
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.000
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.000
anac075 Arabidopsis thaliana AT4G29230 D 0.000
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.000
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I 0.000
anac085 Arabidopsis thaliana AT5G14490 I 0.000
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.000
Aquca_051_00040 Aquilegia coerulea Aquca_051_00040 I 0.000
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.000
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.000
Bo1g016630 Brassica oleracea Bo1g016630 I 0.000
Bo1g017410 Brassica oleracea Bo1g017410 I 0.000
Bo5g043100 Brassica oleracea Bo5g043100 I 0.000
Bo5g055990 Brassica oleracea Bo5g055990 I 0.000
Bo7g047040 Brassica oleracea Bo7g047040 I 0.000
Bo7g052860 Brassica oleracea Bo7g052860 I 0.000
Bo7g113170 Brassica oleracea Bo7g113170 I 0.000
Bo7g113660 Brassica oleracea Bo7g113660 I 0.000
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.000
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N 0.000
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I 0.000
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.000
Bra006257 Brassica rapa Bra006257 I 0.000
Bra011034 Brassica rapa Bra011034 I 0.000
Bra011090 Brassica rapa Bra011090 I 0.000
Bra012470 Brassica rapa Bra012470 I 0.000
Bra024152 Brassica rapa Bra024152 I 0.000
Bra024197 Brassica rapa Bra024197 I 0.000
Bra024733 Brassica rapa Bra024733 I 0.000
Bra032910 Brassica rapa Bra032910 I 0.000
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.000
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.000
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.000
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I 0.000
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.000
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N 0.000
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.000
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I 0.000
Carubv10002665m.g Capsella rubella Carubv10002665m.g I 0.000
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.000
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.000
Carubv10009087m.g Capsella rubella Carubv10009087m.g I 0.000
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.000
Carubv10014004m.g Capsella rubella Carubv10014004m.g N 0.000
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.000
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.000
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.000
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.000
cassava16121.m1 Manihot esculenta cassava16121.m1 I 0.000
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.000
cassava46297.m1 Manihot esculenta cassava46297.m1 I 0.000
Ca_02457 Cicer arietinum Ca_02457 I 0.000
Ca_06348 Cicer arietinum Ca_06348 I 0.000
Ca_11273 Cicer arietinum Ca_11273 I 0.000
Ca_24772 Cicer arietinum Ca_24772 I 0.000
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.000
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I 0.000
Cla009808 Citrullus lanatus Cla009808 I 0.000
Cla011431 Citrullus lanatus Cla011431 I 0.000
Cla020673 Citrullus lanatus Cla020673 I 0.000
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.000
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.000
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.000
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.000
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.000
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.000
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.000
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.000
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.000
F775_07141 Aegilops tauschii F775_07141 I 0.000
F775_07518 Aegilops tauschii F775_07518 I 0.000
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.000
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.000
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.000
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.000
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.000
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.000
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.000
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.000
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.000
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.000
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.000
GLYMA10G34730 Glycine max GLYMA10G34730 I 0.000
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.000
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.000
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.000
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.000
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.000
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.000
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.000
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.000
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.000
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.000
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.000
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.000
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.000
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.000
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.000
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.000
GSMUA_Achr2G09080_001 Musa acuminata GSMUA_Achr2G09080_001 I 0.000
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.000
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.000
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.000
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.000
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.000
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I 0.000
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.000
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.000
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.000
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.000
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.000
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.000
MDP0000124509 Malus domestica MDP0000124509 I 0.000
MDP0000165845 Malus domestica MDP0000165845 I 0.000
MDP0000216205 Malus domestica MDP0000216205 I 0.000
MDP0000276278 Malus domestica MDP0000276278 I 0.000
MDP0000309351 Malus domestica MDP0000309351 I 0.000
mgf012882m Mimulus guttatus mgf012882m I 0.000
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.000
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.000
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.000
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.000
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.000
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.000
MTR_5g053430 Medicago truncatula MTR_5g053430 I 0.000
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.000
NAC010 Arabidopsis thaliana AT1G28470 D 0.000
NAC073 Arabidopsis thaliana AT4G28500 D 0.000
OB01G15780 Oryza brachyantha OB01G15780 I 0.000
OB06G19430 Oryza brachyantha OB06G19430 I 0.000
OBART01G05840 Oryza barthii OBART01G05840 I 0.000
OBART06G10240 Oryza barthii OBART06G10240 I 0.000
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.000
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.000
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.000
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.000
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.000
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.000
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.000
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.000
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.000
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.000
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I 0.000
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.000
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.000
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.000
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.000
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.000
OS01G0191300 Oryza sativa OS01G0191300 I 0.000
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.000
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.000
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.000
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.000
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.000
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.000
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.000
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.000
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.000
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.000
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.000
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.000
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.000
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.000
PK17141.1 Cannabis sativa PK17141.1 I 0.000
PK25812.1 Cannabis sativa PK25812.1 I 0.000
PK27085.1 Cannabis sativa PK27085.1 D 0.000
PK28347.1 Cannabis sativa PK28347.1 I 0.000
Pm010104 Prunus mume Pm010104 I 0.000
Pm027280 Prunus mume Pm027280 I 0.000
Pm029010 Prunus mume Pm029010 I 0.000
POPTR_0004s04900 Populus trichocarpa POPTR_0004s04900 I 0.000
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.000
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.000
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.000
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.000
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.000
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.000
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.000
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.000
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.000
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.000
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.000
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.000
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.000
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.000
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.000
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.000
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.000
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.000
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.000
Si001527m.g Setaria italica Si001527m.g I 0.000
Si002301m.g Setaria italica Si002301m.g I 0.000
Si006639m.g Setaria italica Si006639m.g I 0.000
Si019444m.g Setaria italica Si019444m.g I 0.000
Si024889m.g Setaria italica Si024889m.g I 0.000
SOG1 Arabidopsis thaliana AT1G25580 I 0.000
SOG1 Arabidopsis lyrata scaffold_102939.1 I 0.000
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.000
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.000
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.000
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.000
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.000
TCM_008229 Theobroma cacao TCM_008229 I 0.000
TCM_011869 Theobroma cacao TCM_011869 I 0.000
TCM_029798 Theobroma cacao TCM_029798 I 0.000
TCM_037747 Theobroma cacao TCM_037747 I 0.000
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I 0.000
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.000
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N 0.000
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.000
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.000
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.000
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.000
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.000
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.000
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.000
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.000
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.000
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.000
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.000