Pavir.J38656 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J38656 T289480_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J38656.1.p Myb 424 479

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N 0.863
F775_01832 Aegilops tauschii F775_01832 N 0.733
GRMZM2G010085 Zea mays GRMZM2G010085 N 0.873
LjSGA_031154.1 Lotus japonicus LjSGA_031154.1 N 0.670
LPERR01G13970 Leersia perrieri LPERR01G13970 N 0.872
mgf011812m Mimulus guttatus mgf011812m N 0.785
MLOC_10329 Hordeum vulgare MLOC_10329 N 0.733
OB01G25270 Oryza brachyantha OB01G25270 N 0.872
OBART01G15490 Oryza barthii OBART01G15490 N 0.846
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N 0.846
OLONG_013778 Oryza longistaminata OLONG_013778 N 0.846
OMERI01G14330 Oryza meridionalis OMERI01G14330 N 0.846
OPUNC01G16280 Oryza punctata OPUNC01G16280 N 0.846
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N 0.846
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N 0.846
OS01G0367900 Oryza sativa OS01G0367900 N 0.846
Pavir.Ea01374 Panicum virgatum Pavir.Ea01374 N 0.872
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N 0.872
Pavir.J08354 Panicum virgatum Pavir.J08354 N 0.827
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N 0.761
Sb03g014780 Sorghum bicolor Sb03g014780 N 0.867
Si000122m.g Setaria italica Si000122m.g N 0.872
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N 0.752
Traes_1AS_0523686DD Triticum aestivum Traes_1AS_0523686DD N 0.723
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N 0.733
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N 0.733
TRIUR3_20056 Triticum urartu TRIUR3_20056 N 0.733