Thhalv10016057m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10016057m.g T290068_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.661 0.753
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.661 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10016057m Myb 116 162
Thhalv10016057m Myb 168 213

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008763 Oryza indica BGIOSGA008763 N 0.000
BGIOSGA008764 Oryza indica BGIOSGA008764 N 0.000
BRADI3G50930 Brachypodium distachyon BRADI3G50930 N 0.000
F775_27777 Aegilops tauschii F775_27777 N 0.000
GRMZM2G037792 Zea mays GRMZM2G037792 N 0.000
GRMZM2G098800 Zea mays GRMZM2G098800 N 0.000
GRMZM2G110579 Zea mays GRMZM2G110579 N 0.000
GRMZM5G825321 Zea mays GRMZM5G825321 N 0.000
MLOC_43989 Hordeum vulgare MLOC_43989 N 0.000
OB02G34130 Oryza brachyantha OB02G34130 N 0.000
OBART02G26880 Oryza barthii OBART02G26880 N 0.000
OBART02G26890 Oryza barthii OBART02G26890 N 0.000
OBART04G21150 Oryza barthii OBART04G21150 N 0.000
OGLUM02G27370 Oryza glumaepatula OGLUM02G27370 N 0.000
OGLUM02G27380 Oryza glumaepatula OGLUM02G27380 N 0.000
OGLUM04G21070 Oryza glumaepatula OGLUM04G21070 N 0.000
OLONG_010301 Oryza longistaminata OLONG_010301 N 0.000
OMERI04G17630 Oryza meridionalis OMERI04G17630 N 0.000
ONIVA02G29390 Oryza nivara ONIVA02G29390 N 0.000
ONIVA06G04040 Oryza nivara ONIVA06G04040 N 0.000
OPUNC02G24500 Oryza punctata OPUNC02G24500 N 0.000
OPUNC04G18860 Oryza punctata OPUNC04G18860 N 0.000
ORGLA02G0231500 Oryza glaberrima ORGLA02G0231500 N 0.000
ORGLA02G0231600 Oryza glaberrima ORGLA02G0231600 N 0.000
ORGLA04G0182200 Oryza glaberrima ORGLA04G0182200 N 0.000
ORUFI02G28320 Oryza rufipogon ORUFI02G28320 N 0.000
ORUFI02G28330 Oryza rufipogon ORUFI02G28330 N 0.000
ORUFI04G22740 Oryza rufipogon ORUFI04G22740 N 0.000
OS02G0662700 Oryza sativa OS02G0662700 N 0.000
OS02G0663100 Oryza sativa OS02G0663100 N 0.000
OS04G0555000 Oryza sativa OS04G0555000 N 0.000
Pavir.Ga01057 Panicum virgatum Pavir.Ga01057 N 0.000
Sb04g032570 Sorghum bicolor Sb04g032570 N 0.000
Sb04g032590 Sorghum bicolor Sb04g032590 N 0.000
Sb06g024820 Sorghum bicolor Sb06g024820 N 0.000
Si016508m.g Setaria italica Si016508m.g N 0.000
Traes_6AL_4084532FC1 Triticum aestivum Traes_6AL_4084532FC1 N 0.000
Traes_6BL_972224088 Triticum aestivum Traes_6BL_972224088 N 0.000