Bo2g011120 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo2g011120 T292315_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.943 0.981
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.943 0.981
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.943 0.981
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g011120.1 NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava37235.valid.m1 Manihot esculenta cassava37235.valid.m1 N 0.000
cassava5602.m1 Manihot esculenta cassava5602.m1 N 0.000
Ciclev10016434m.g Citrus clementina Ciclev10016434m.g N 0.000
Eucgr.H03362 Eucalyptus grandis Eucgr.H03362 N 0.000
MDP0000842702 Malus domestica MDP0000842702 N 0.000
orange1.1g025990m.g Citrus sinensis orange1.1g025990m.g N 0.000
Pm016114 Prunus mume Pm016114 N 0.000
POPTR_0017s09030 Populus trichocarpa POPTR_0017s09030 N 0.000
SapurV1A.0123s0250 Salix purpurea SapurV1A.0123s0250 N 0.000
SapurV1A.0169s0230 Salix purpurea SapurV1A.0169s0230 N 0.000
SapurV1A.3527s0010 Salix purpurea SapurV1A.3527s0010 N 0.000