CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g025990m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g025990m.g
T298672_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g025990m
NAC/NAM
16
142
PIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHL
orange1.1g029281m
NAC/NAM
16
142
PIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHL
orange1.1g030168m
NAC/NAM
2
79
KEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10016434m.g
Citrus clementina
Ciclev10016434m.g
N
0.966
MDP0000842702
Malus domestica
MDP0000842702
N
0.910
SapurV1A.0123s0250
Salix purpurea
SapurV1A.0123s0250
N
0.897
POPTR_0001s33260
Populus trichocarpa
POPTR_0001s33260
N
0.895
POPTR_0017s09030
Populus trichocarpa
POPTR_0017s09030
N
0.882