CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava37235.valid.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava37235.valid.m1
T296900_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava37235.valid.m1
NAC/NAM
15
137
PPGFRFQPTDEELVFEYLKRKVLSWPLPASIIPEINVFKFDPWDLPGDIEQERYFFSNKEAKYPNGNRINRATASGFWKATGVDRQIGSSKNQAMGMKKTLVFYRGKNPHASKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.917
PGSC0003DMG400011891
Solanum tuberosum
PGSC0003DMG400011891
N
0.915
Solyc01g009860.2
Solanum lycopersicum
Solyc01g009860.2
N
0.915
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.914
30147.m014441
Ricinus communis
30147.m014441
N
0.911
Gorai.005G195300
Gossypium raimondii
Gorai.005G195300
I
0.910
TCM_014713
Theobroma cacao
TCM_014713
I
0.907
TCM_008477
Theobroma cacao
TCM_008477
I
0.906
VIT_17s0000g00770
Vitis vinifera
VIT_17s0000g00770
N
0.906
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.903
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.902
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.902
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.902
MTR_7g005280
Medicago truncatula
MTR_7g005280
I
0.892
SapurV1A.0173s0020
Salix purpurea
SapurV1A.0173s0020
I
0.889
Lus10001809.g
Linum usitatissimum
Lus10001809.g
I
0.888
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.888
POPTR_0003s16490
Populus trichocarpa
POPTR_0003s16490
I
0.887
Cla001517
Citrullus lanatus
Cla001517
I
0.886
PRUPE_ppa010222mg
Prunus persica
PRUPE_ppa010222mg
I
0.885
Pm007070
Prunus mume
Pm007070
I
0.885
Cucsa.349370
Cucumis sativus
Cucsa.349370
I
0.885
Lus10002581.g
Linum usitatissimum
Lus10002581.g
I
0.885
Eucgr.B03537
Eucalyptus grandis
Eucgr.B03537
I
0.884
POPTR_0001s13380
Populus trichocarpa
POPTR_0001s13380
I
0.882
Gorai.012G125500
Gossypium raimondii
Gorai.012G125500
I
0.877
evm.TU.supercontig_4.138
Carica papaya
evm.TU.supercontig_4.138
N
0.876
PK12461.1
Cannabis sativa
PK12461.1
I
0.876
POPTR_0001s33260
Populus trichocarpa
POPTR_0001s33260
N
0.872
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.872