CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g009860.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc01g009860.2
T295810_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g009860.2.1
NAC/NAM
15
141
PPGFRFRPTDEELVVQYLKRKVFSFPLPASIIPEVEVYKSDPWDLPGDMEQEKYFFSTKEVKYPNGNRSNRATNSGYWKATGIDKQIILRGRQQQQQLIGLKKTLVFYRGKSPHGCRTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400011891
Solanum tuberosum
PGSC0003DMG400011891
N
0.952
cassava37235.valid.m1
Manihot esculenta
cassava37235.valid.m1
N
0.915
MTR_7g005280
Medicago truncatula
MTR_7g005280
I
0.913
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.911
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.910
Lus10001809.g
Linum usitatissimum
Lus10001809.g
I
0.900
TCM_014713
Theobroma cacao
TCM_014713
I
0.897
Lus10002581.g
Linum usitatissimum
Lus10002581.g
I
0.897
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.897
Eucgr.B03537
Eucalyptus grandis
Eucgr.B03537
I
0.895
Gorai.005G195300
Gossypium raimondii
Gorai.005G195300
I
0.892
SapurV1A.0173s0020
Salix purpurea
SapurV1A.0173s0020
I
0.890
POPTR_0003s16490
Populus trichocarpa
POPTR_0003s16490
I
0.888
POPTR_0001s13380
Populus trichocarpa
POPTR_0001s13380
I
0.887
Cla001517
Citrullus lanatus
Cla001517
I
0.887
PRUPE_ppa010222mg
Prunus persica
PRUPE_ppa010222mg
I
0.886
Pm007070
Prunus mume
Pm007070
I
0.886
Cucsa.349370
Cucumis sativus
Cucsa.349370
I
0.886
TCM_008477
Theobroma cacao
TCM_008477
I
0.885
PK12461.1
Cannabis sativa
PK12461.1
I
0.885
Gorai.012G125500
Gossypium raimondii
Gorai.012G125500
I
0.883
SapurV1A.0453s0210
Salix purpurea
SapurV1A.0453s0210
I
0.880
VIT_17s0000g00770
Vitis vinifera
VIT_17s0000g00770
N
0.877
30128.m009035
Ricinus communis
30128.m009035
I
0.872