CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400028662
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400028662
T295161_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400073776
NAC/NAM
5
131
PPGFRFHPTDVELIMYYLKRKITGKKFHFEVITELNIYKFSPWDLPDKCCYKSKDLEWYFFCPRERKYASGGRMNRATDSGYWKTTGKDRYVTYDEKIVGSVKTLVFHLGHPPRGQRTDWLIHEYKF
PGSC0003DMT400073777
NAC/NAM
5
131
PPGFRFHPTDVELIMYYLKRKITGKKFHFEVITELNIYKFSPWDLPDKCCYKSKDLEWYFFCPRERKYASGGRMNRATDSGYWKTTGKDRYVTYDEKIVGSVKTLVFHLGHPPRGQRTDWLIHEYKF
PGSC0003DMT400073779
NAC/NAM
5
131
PPGFRFHPTDVELIMYYLKRKITGKKFHFEVITELNIYKFSPWDLPDKCCYKSKDLEWYFFCPRERKYASGGRMNRATDSGYWKTTGKDRYVTYDEKIVGSVKTLVFHLGHPPRGQRTDWLIHEYKF
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.893
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.893
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.893
gene27615-v1.0-hybrid
Fragaria vesca
gene27615-v1.0-hybrid
N
0.871
GLYMA04G39140
Glycine max
GLYMA04G39140
N
0.873
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.913
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
0.901
mgf025137m
Mimulus guttatus
mgf025137m
N
0.872
Solyc03g078120.2
Solanum lycopersicum
Solyc03g078120.2
N
0.888
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.938