CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf009391m
(
Mimulus guttatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
mgf009391m
T297078_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.946
0.851
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.935
0.842
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.935
0.842
NAC030
M00974_2.00
Arabidopsis thaliana
NYACGBMWNN
NNWKVCGTRN
PBM
Lindemose et al.(2014)
VND7
0.932
0.868
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.898
0.781
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.898
0.781
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.898
0.781
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.885
0.746
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.885
0.746
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.881
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf009391m
NAC/NAM
6
133
PPGFRFHPTEEELVGYYLKRKIDSQKIDLDVITDIDLYRMEPWDIEGRCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATTAGFWKATGRDKAVLSKERIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Mimulus guttatus
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025973
Oryza indica
BGIOSGA025973
N
BRADI1G24140
Brachypodium distachyon
BRADI1G24140
N
GRMZM2G081782
Zea mays
GRMZM2G081782
N
LPERR07G16580
Leersia perrieri
LPERR07G16580
N
MLOC_52196
Hordeum vulgare
MLOC_52196
N
OBART07G19250
Oryza barthii
OBART07G19250
N
OGLUM07G19030
Oryza glumaepatula
OGLUM07G19030
N
OLONG_002240
Oryza longistaminata
OLONG_002240
N
ONIVA07G17600
Oryza nivara
ONIVA07G17600
N
ORGLA07G0246500
Oryza glaberrima
ORGLA07G0246500
N
ORUFI07G20030
Oryza rufipogon
ORUFI07G20030
N
OS07G0569700
Oryza sativa
OS07G0569700
N
Pavir.Ba00594
Panicum virgatum
Pavir.Ba00594
N
Pavir.J03938
Panicum virgatum
Pavir.J03938
N
Sb02g036840
Sorghum bicolor
Sb02g036840
N
Si030697m.g
Setaria italica
Si030697m.g
N
Traes_2BS_67D862F4A
Triticum aestivum
Traes_2BS_67D862F4A
N
Traes_2DS_2CE71025C
Triticum aestivum
Traes_2DS_2CE71025C
N
TRIUR3_28482
Triticum urartu
TRIUR3_28482
N