NAC030 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT1G71930 T292044_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC030
M00974_2.00		 Arabidopsis thaliana
NYACGBMWNN
NNWKVCGTRN		 PBM
Lindemose et al.(2014)
VND7		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.901 0.772
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.901 0.772
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.901 0.772
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.896 0.816
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.877 0.789
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.877 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00974_2.00 NAC/NAM 10 137

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G71930.1 NAC/NAM 10 137
AT1G71930.2 NAC/NAM 10 137

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.10273s0160 Boechera stricta Bostr.10273s0160 I 0.969
Carubv10020645m.g Capsella rubella Carubv10020645m.g I 0.969
Bra016098 Brassica rapa Bra016098 I 0.969
Thhalv10018853m.g Eutrema salsugineum Thhalv10018853m.g I 0.969
Cagra.4006s0034 Capsella grandiflora Cagra.4006s0034 I 0.969
Bo6g114440 Brassica oleracea Bo6g114440 I 0.966
VND7 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001196 I 0.962
Bra007996 Brassica rapa Bra007996 I 0.951
GLYMA20G31551 Glycine max GLYMA20G31551 I 0.951
Bo2g075130 Brassica oleracea Bo2g075130 I 0.951
Eucgr.F02615 Eucalyptus grandis Eucgr.F02615 I 0.949
MTR_1g096430 Medicago truncatula MTR_1g096430 I 0.949
PGSC0003DMG400000887 Solanum tuberosum PGSC0003DMG400000887 I 0.948
Ca_04309 Cicer arietinum Ca_04309 I 0.946
cassava25360.m1 Manihot esculenta cassava25360.m1 I 0.944
MDP0000849944 Malus domestica MDP0000849944 I 0.943
Pm022184 Prunus mume Pm022184 I 0.943
VND7 Vitis vinifera VIT_18s0072g01060 I 0.943
SapurV1A.0179s0040 Salix purpurea SapurV1A.0179s0040 I 0.942
GLYMA10G36050 Glycine max GLYMA10G36050 I 0.941
PRUPE_ppa016236mg Prunus persica PRUPE_ppa016236mg I 0.941
LjSGA_075859.1 Lotus japonicus LjSGA_075859.1 I 0.941
orange1.1g019821m.g Citrus sinensis orange1.1g019821m.g I 0.940
Ciclev10003255m.g Citrus clementina Ciclev10003255m.g I 0.940
evm.TU.contig_30558 Carica papaya evm.TU.contig_30558 I 0.940
POPTR_0013s11740 Populus trichocarpa POPTR_0013s11740 I 0.939
29728.m000815 Ricinus communis 29728.m000815 I 0.939
MDP0000902822 Malus domestica MDP0000902822 I 0.938
TCM_036364 Theobroma cacao TCM_036364 I 0.937
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.934
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.934
Cla016604 Citrullus lanatus Cla016604 I 0.932
Lus10017915.g Linum usitatissimum Lus10017915.g I 0.932
mgf009391m Mimulus guttatus mgf009391m I 0.932
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.931
cassava40790.m1 Manihot esculenta cassava40790.m1 I 0.928
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.927
Cucsa.240650 Cucumis sativus Cucsa.240650 I 0.927
Solyc11g018660.1 Solanum lycopersicum Solyc11g018660.1 I 0.925
POPTR_0019s11330 Populus trichocarpa POPTR_0019s11330 I 0.923
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.923
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.923
Ca_01981 Cicer arietinum Ca_01981 I 0.923
Gorai.013G140700 Gossypium raimondii Gorai.013G140700 I 0.920
SapurV1A.0287s0280 Salix purpurea SapurV1A.0287s0280 I 0.920
SapurV1A.0287s0290 Salix purpurea SapurV1A.0287s0290 I 0.920
SapurV1A.1801s0020 Salix purpurea SapurV1A.1801s0020 I 0.920
SapurV1A.2633s0010 Salix purpurea SapurV1A.2633s0010 I 0.920
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.914
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.914
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.914
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.914
Bra012065 Brassica rapa Bra012065 I 0.913
Bo7g065010 Brassica oleracea Bo7g065010 I 0.913
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.910
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.906
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.902
NAC105 Arabidopsis thaliana AT5G66300 D 0.901
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.899
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.899
PK11173.1 Cannabis sativa PK11173.1 I 0.899
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.899
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.898
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.898
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.898
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.898
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.898
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.898
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.898
TCM_000235 Theobroma cacao TCM_000235 I 0.898
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.898
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.897
Bo7g011640 Brassica oleracea Bo7g011640 I 0.897
NAC037 Arabidopsis thaliana AT2G18060 D 0.896
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.896
28623.m000400 Ricinus communis 28623.m000400 I 0.896
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.896
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.895
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.895
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.895
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.894
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.894
mgf022574m Mimulus guttatus mgf022574m I 0.892
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.892
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.892
Bo3g093950 Brassica oleracea Bo3g093950 I 0.892
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.890
Bra017750 Brassica rapa Bra017750 I 0.888
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.888
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.888
Bo7g117820 Brassica oleracea Bo7g117820 I 0.888
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.888
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.888
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.888
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.885
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.883
Bra011667 Brassica rapa Bra011667 I 0.882
Bo1g005810 Brassica oleracea Bo1g005810 I 0.882
MDP0000136180 Malus domestica MDP0000136180 I 0.881
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.881
Pm026735 Prunus mume Pm026735 I 0.881
MDP0000299959 Malus domestica MDP0000299959 I 0.881
MDP0000298965 Malus domestica MDP0000298965 I 0.881
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.881
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.881
MDP0000176447 Malus domestica MDP0000176447 I 0.881
Si036363m.g Setaria italica Si036363m.g I 0.880
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.880
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.880
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.880
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.879
OB03G12100 Oryza brachyantha OB03G12100 I 0.877
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.877
OBART03G02180 Oryza barthii OBART03G02180 I 0.877
ANAC076 Arabidopsis thaliana AT4G36160 D 0.877
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.877
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.877
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.877
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.877
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.877
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.877
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.877
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.877
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.876
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.876
F775_20020 Aegilops tauschii F775_20020 I 0.876
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.876
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.876
OB10G23740 Oryza brachyantha OB10G23740 I 0.875
Cla014492 Citrullus lanatus Cla014492 I 0.875
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.875
OS10G0532000 Oryza sativa OS10G0532000 I 0.875
mgf026153m Mimulus guttatus mgf026153m I 0.874
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.873
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.873
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.873
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.871
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.871