Ciclev10003255m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10003255m.g T297569_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.946 0.860
NAC030
M00974_2.00 		Arabidopsis thaliana
NYACGBMWNN
NNWKVCGTRN		 PBM
Lindemose et al.(2014)
VND7 		0.940 0.886
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.936 0.851
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.936 0.851
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.899 0.807
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.899 0.807
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.899 0.807
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.887 0.772
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.887 0.772
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.873 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10003255m NAC/NAM 15 142

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g019821m.g Citrus sinensis orange1.1g019821m.g I 0.972
cassava25360.m1 Manihot esculenta cassava25360.m1 I 0.970
29728.m000815 Ricinus communis 29728.m000815 I 0.968
evm.TU.contig_30558 Carica papaya evm.TU.contig_30558 I 0.968
SapurV1A.0179s0040 Salix purpurea SapurV1A.0179s0040 I 0.968
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.967
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.967
TCM_036364 Theobroma cacao TCM_036364 I 0.967
Pm022184 Prunus mume Pm022184 I 0.967
POPTR_0013s11740 Populus trichocarpa POPTR_0013s11740 I 0.966
PRUPE_ppa016236mg Prunus persica PRUPE_ppa016236mg I 0.965
cassava40790.m1 Manihot esculenta cassava40790.m1 I 0.965
MDP0000849944 Malus domestica MDP0000849944 I 0.965
Lus10017915.g Linum usitatissimum Lus10017915.g I 0.963
MDP0000902822 Malus domestica MDP0000902822 I 0.962
Solyc11g018660.1 Solanum lycopersicum Solyc11g018660.1 I 0.959
Cla016604 Citrullus lanatus Cla016604 I 0.958
mgf009391m Mimulus guttatus mgf009391m I 0.958
Bo2g075130 Brassica oleracea Bo2g075130 I 0.956
Cucsa.240650 Cucumis sativus Cucsa.240650 I 0.954
Bra007996 Brassica rapa Bra007996 I 0.953
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.947
TCM_000235 Theobroma cacao TCM_000235 I 0.947
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.947
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.947
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.947
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.947
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.947
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.947
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.947
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.947
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.947
NAC037 Arabidopsis thaliana AT2G18060 D 0.946
Bo7g011640 Brassica oleracea Bo7g011640 I 0.946
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.946
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.946
28623.m000400 Ricinus communis 28623.m000400 I 0.946
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.946
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.946
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.945
MTR_1g096430 Medicago truncatula MTR_1g096430 I 0.945
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.945
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.944
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.944
PGSC0003DMG400000887 Solanum tuberosum PGSC0003DMG400000887 I 0.944
PK11173.1 Cannabis sativa PK11173.1 I 0.944
GLYMA20G31551 Glycine max GLYMA20G31551 I 0.943
Eucgr.F02615 Eucalyptus grandis Eucgr.F02615 I 0.943
Bo3g093950 Brassica oleracea Bo3g093950 I 0.942
Ca_04309 Cicer arietinum Ca_04309 I 0.942
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.942
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.942
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.942
Bo7g117820 Brassica oleracea Bo7g117820 I 0.941
Bra017750 Brassica rapa Bra017750 I 0.941
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.941
mgf022574m Mimulus guttatus mgf022574m I 0.941
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.941
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.941
NAC030 Arabidopsis thaliana AT1G71930 D 0.940
Bo6g114440 Brassica oleracea Bo6g114440 I 0.940
Bra016098 Brassica rapa Bra016098 I 0.940
Bostr.10273s0160 Boechera stricta Bostr.10273s0160 I 0.940
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.940
Cagra.4006s0034 Capsella grandiflora Cagra.4006s0034 I 0.940
Carubv10020645m.g Capsella rubella Carubv10020645m.g I 0.940
Thhalv10018853m.g Eutrema salsugineum Thhalv10018853m.g I 0.940
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.940
Bo1g005810 Brassica oleracea Bo1g005810 I 0.939
Bra011667 Brassica rapa Bra011667 I 0.939
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.939
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.939
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.938
Pm026735 Prunus mume Pm026735 I 0.938
MDP0000136180 Malus domestica MDP0000136180 I 0.938
MDP0000176447 Malus domestica MDP0000176447 I 0.938
MDP0000298965 Malus domestica MDP0000298965 I 0.938
MDP0000299959 Malus domestica MDP0000299959 I 0.938
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.938
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.938
POPTR_0019s11330 Populus trichocarpa POPTR_0019s11330 I 0.937
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.937
LjSGA_075859.1 Lotus japonicus LjSGA_075859.1 I 0.937
ANAC076 Arabidopsis thaliana AT4G36160 D 0.936
VND7 Vitis vinifera VIT_18s0072g01060 I 0.936
mgf026153m Mimulus guttatus mgf026153m I 0.936
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.936
SapurV1A.0287s0280 Salix purpurea SapurV1A.0287s0280 I 0.935
SapurV1A.0287s0290 Salix purpurea SapurV1A.0287s0290 I 0.935
SapurV1A.1801s0020 Salix purpurea SapurV1A.1801s0020 I 0.935
SapurV1A.2633s0010 Salix purpurea SapurV1A.2633s0010 I 0.935
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.935
VND7 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001196 I 0.934
Cla014492 Citrullus lanatus Cla014492 I 0.934
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.933
Si036363m.g Setaria italica Si036363m.g I 0.933
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.933
Bra039915 Brassica rapa Bra039915 I 0.932
GLYMA10G36050 Glycine max GLYMA10G36050 I 0.932
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.931
F775_20020 Aegilops tauschii F775_20020 I 0.931
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.931
OB03G12100 Oryza brachyantha OB03G12100 I 0.931
OBART03G02180 Oryza barthii OBART03G02180 I 0.931
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.931
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.931
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.931
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.931
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.931
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.931
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.931
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.931
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.931
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.931
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.930
OB10G23740 Oryza brachyantha OB10G23740 I 0.930
OS10G0532000 Oryza sativa OS10G0532000 I 0.930
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.930
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.929
Si039467m.g Setaria italica Si039467m.g I 0.926
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.925
Pavir.Ia02924 Panicum virgatum Pavir.Ia02924 I 0.925
Pavir.Ib02477 Panicum virgatum Pavir.Ib02477 I 0.925
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.924
OLONG_016152 Oryza longistaminata OLONG_016152 I 0.923
OMERI10G13220 Oryza meridionalis OMERI10G13220 I 0.923
AMTR_s00017p00119990 Amborella trichopoda AMTR_s00017p00119990 I 0.922
Ca_01981 Cicer arietinum Ca_01981 I 0.922
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.921
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.921
OBART10G16620 Oryza barthii OBART10G16620 I 0.920
OGLUM10G16690 Oryza glumaepatula OGLUM10G16690 I 0.920
ONIVA10G18400 Oryza nivara ONIVA10G18400 I 0.920
ORUFI10G17730 Oryza rufipogon ORUFI10G17730 I 0.920
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.912
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.912
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.912
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.912
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.912
Bo7g065010 Brassica oleracea Bo7g065010 I 0.911
Bra012065 Brassica rapa Bra012065 I 0.911
Aquca_023_00039 Aquilegia coerulea Aquca_023_00039 I 0.911
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.908
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.907
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.905
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.903
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.903
NAC105 Arabidopsis thaliana AT5G66300 D 0.899
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.899
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.899
mgf021916m Mimulus guttatus mgf021916m I 0.899
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.899
TCM_014939 Theobroma cacao TCM_014939 I 0.898
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.898
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.898
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.898
Gorai.013G140700 Gossypium raimondii Gorai.013G140700 I 0.898
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.898
PK23416.1 Cannabis sativa PK23416.1 I 0.898
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.897
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.896
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.895
Cla006372 Citrullus lanatus Cla006372 I 0.895
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.895
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.895
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.895
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.894
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.894
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.894
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.894
Pm019488 Prunus mume Pm019488 I 0.894
Pm019490 Prunus mume Pm019490 I 0.894
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.894
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.893
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.893
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.893
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.893
TCM_016035 Theobroma cacao TCM_016035 I 0.893
28200.m000189 Ricinus communis 28200.m000189 I 0.893
30147.m014211 Ricinus communis 30147.m014211 I 0.893
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.893
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.893
MDP0000320566 Malus domestica MDP0000320566 I 0.893
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.893
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.893
PK28510.1 Cannabis sativa PK28510.1 I 0.893
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.892
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.891
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.890
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.890
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.890
OPUNC10G15070 Oryza punctata OPUNC10G15070 I 0.889
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.889
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.889
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.888
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.888
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.888
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.888
Pm023559 Prunus mume Pm023559 I 0.888
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.888
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.888
NAC007 Arabidopsis thaliana AT1G12260 D 0.887
Bo5g017120 Brassica oleracea Bo5g017120 I 0.887
Bo8g062650 Brassica oleracea Bo8g062650 I 0.887
Bra016783 Brassica rapa Bra016783 I 0.887
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.887
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.887
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.887
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.887
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.887
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.887
F775_11081 Aegilops tauschii F775_11081 I 0.886
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.886
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.886
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.886
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.886
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.886
mgf020336m Mimulus guttatus mgf020336m I 0.885
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.884
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.884
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.883
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.883
Bra019750 Brassica rapa Bra019750 I 0.882
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.881
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.881
Ca_08693 Cicer arietinum Ca_08693 I 0.880
Bo8g108300 Brassica oleracea Bo8g108300 I 0.878
Bra026981 Brassica rapa Bra026981 I 0.878
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.878
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.878
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.877
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.875
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.875
Si006565m.g Setaria italica Si006565m.g I 0.875
GSMUA_Achr11G03780_001 Musa acuminata GSMUA_Achr11G03780_001 I 0.874
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.874
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.873
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.873
OB06G11970 Oryza brachyantha OB06G11970 I 0.873
OBART06G01950 Oryza barthii OBART06G01950 I 0.873
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.873
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.873
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.873
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.873
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.873
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.873
OS06G0131700 Oryza sativa OS06G0131700 D 0.873
Ca_02365 Cicer arietinum Ca_02365 I 0.873