Gorai.013G140700 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.013G140700 T298182_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC030
M00974_2.00 		Arabidopsis thaliana
NYACGBMWNN
NNWKVCGTRN		 PBM
Lindemose et al.(2014)
VND7 		0.920 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G140700.1 NAC/NAM 9 136
Gorai.013G140700.2 NAC/NAM 9 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g114440 Brassica oleracea Bo6g114440 I 0.932
NAC030 Arabidopsis thaliana AT1G71930 D 0.920
Bra016098 Brassica rapa Bra016098 I 0.920
Bostr.10273s0160 Boechera stricta Bostr.10273s0160 I 0.920
Cagra.4006s0034 Capsella grandiflora Cagra.4006s0034 I 0.920
Carubv10020645m.g Capsella rubella Carubv10020645m.g I 0.920
Thhalv10018853m.g Eutrema salsugineum Thhalv10018853m.g I 0.920
GLYMA20G31551 Glycine max GLYMA20G31551 I 0.917
Pm022184 Prunus mume Pm022184 I 0.917
PRUPE_ppa016236mg Prunus persica PRUPE_ppa016236mg I 0.914
MDP0000849944 Malus domestica MDP0000849944 I 0.914
MTR_1g096430 Medicago truncatula MTR_1g096430 I 0.913
PGSC0003DMG400000887 Solanum tuberosum PGSC0003DMG400000887 I 0.913
VND7 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001196 I 0.910
Ca_04309 Cicer arietinum Ca_04309 I 0.909
Eucgr.F02615 Eucalyptus grandis Eucgr.F02615 I 0.908
MDP0000902822 Malus domestica MDP0000902822 I 0.908
VND7 Vitis vinifera VIT_18s0072g01060 I 0.906
cassava25360.m1 Manihot esculenta cassava25360.m1 I 0.904
GLYMA10G36050 Glycine max GLYMA10G36050 I 0.901
SapurV1A.0179s0040 Salix purpurea SapurV1A.0179s0040 I 0.901
LjSGA_075859.1 Lotus japonicus LjSGA_075859.1 I 0.900
evm.TU.contig_30558 Carica papaya evm.TU.contig_30558 I 0.899
Ciclev10003255m.g Citrus clementina Ciclev10003255m.g I 0.898
orange1.1g019821m.g Citrus sinensis orange1.1g019821m.g I 0.898
POPTR_0013s11740 Populus trichocarpa POPTR_0013s11740 I 0.897
TCM_036364 Theobroma cacao TCM_036364 I 0.897
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.896
SELMODRAFT_89986 Selaginella moellendorffii SELMODRAFT_89986 I 0.893
SELMODRAFT_93824 Selaginella moellendorffii SELMODRAFT_93824 I 0.893
29728.m000815 Ricinus communis 29728.m000815 I 0.893
Lus10017915.g Linum usitatissimum Lus10017915.g I 0.887
Bo2g075130 Brassica oleracea Bo2g075130 I 0.885
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.885
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.885
OB08G10370 Oryza brachyantha OB08G10370 N 0.881
OPUNC08G00360 Oryza punctata OPUNC08G00360 N 0.881
OS08G0103900 Oryza sativa OS08G0103900 N 0.881
Cla016604 Citrullus lanatus Cla016604 I 0.881
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.880
cassava40790.m1 Manihot esculenta cassava40790.m1 I 0.879
LPERR08G00380 Leersia perrieri LPERR08G00380 N 0.878
OMERI08G00600 Oryza meridionalis OMERI08G00600 N 0.878
mgf009391m Mimulus guttatus mgf009391m I 0.878
Bra007996 Brassica rapa Bra007996 I 0.877
OGLUM08G00350 Oryza glumaepatula OGLUM08G00350 N 0.877
ORUFI08G00330 Oryza rufipogon ORUFI08G00330 N 0.877
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.877
Solyc11g018660.1 Solanum lycopersicum Solyc11g018660.1 I 0.876
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.874
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.873
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.873
Cucsa.240650 Cucumis sativus Cucsa.240650 I 0.873
MTR_8g076110 Medicago truncatula MTR_8g076110 N 0.872