MDP0000198235 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000198235 T298437_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.874 0.634
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.874 0.634
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000198235 NAC/NAM 25 145

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014236 Ricinus communis 30170.m014236 I 0.910
Aquca_007_00948 Aquilegia coerulea Aquca_007_00948 I 0.908
Aquca_015_00272 Aquilegia coerulea Aquca_015_00272 I 0.903
Bo2g089890 Brassica oleracea Bo2g089890 I 0.875
Bo6g120460 Brassica oleracea Bo6g120460 I 0.892
Bostr.20129s0079 Boechera stricta Bostr.20129s0079 I 0.878
Bra008259 Brassica rapa Bra008259 I 0.892
Bra015750 Brassica rapa Bra015750 I 0.892
Cagra.0799s0114 Capsella grandiflora Cagra.0799s0114 I 0.874
Carubv10022061m.g Capsella rubella Carubv10022061m.g I 0.874
cassava21054.m1 Manihot esculenta cassava21054.m1 I 0.899
cassava21580.m1 Manihot esculenta cassava21580.m1 I 0.911
Ciclev10001403m.g Citrus clementina Ciclev10001403m.g I 0.910
Cla023834 Citrullus lanatus Cla023834 I 0.915
CUC3 Arabidopsis lyrata fgenesh2_kg.2__1929__AT1G76420.1 I 0.872
CUC3 Vitis vinifera VIT_18s0122g00800 I 0.911
Cucsa.272370 Cucumis sativus Cucsa.272370 I 0.915
Eucgr.F03588 Eucalyptus grandis Eucgr.F03588 I 0.895
evm.TU.supercontig_286.12 Carica papaya evm.TU.supercontig_286.12 I 0.890
gene31474-v1.0-hybrid Fragaria vesca gene31474-v1.0-hybrid I 0.896
Gorai.002G113300 Gossypium raimondii Gorai.002G113300 I 0.889
Gorai.009G186000 Gossypium raimondii Gorai.009G186000 I 0.902
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.875
GRMZM2G430522 Zea mays GRMZM2G430522 I 0.877
GSMUA_Achr9G20090_001 Musa acuminata GSMUA_Achr9G20090_001 I 0.895
Lus10013205.g Linum usitatissimum Lus10013205.g I 0.893
Lus10030723.g Linum usitatissimum Lus10030723.g I 0.917
MDP0000167208 Malus domestica MDP0000167208 I 0.944
MDP0000191344 Malus domestica MDP0000191344 I 0.944
mgf017531m Mimulus guttatus mgf017531m I 0.878
mgf018675m Mimulus guttatus mgf018675m I 0.897
mgf023466m Mimulus guttatus mgf023466m I 0.911
NAC031 Arabidopsis thaliana AT1G76420 D 0.874
OB08G27000 Oryza brachyantha OB08G27000 I 0.873
orange1.1g016283m.g Citrus sinensis orange1.1g016283m.g I 0.910
Pavir.Fa00294 Panicum virgatum Pavir.Fa00294 I 0.883
Pavir.Fa00438 Panicum virgatum Pavir.Fa00438 I 0.883
Pavir.Fb01938 Panicum virgatum Pavir.Fb01938 I 0.887
PK13964.1 Cannabis sativa PK13964.1 I 0.879
Pm022916 Prunus mume Pm022916 I 0.919
POPTR_0002s00730 Populus trichocarpa POPTR_0002s00730 I 0.905
POPTR_0005s27720 Populus trichocarpa POPTR_0005s27720 I 0.911
PRUPE_ppa022238mg Prunus persica PRUPE_ppa022238mg I 0.909
SapurV1A.0016s0340 Salix purpurea SapurV1A.0016s0340 I 0.901
SapurV1A.0266s0070 Salix purpurea SapurV1A.0266s0070 I 0.911
Sb07g027650 Sorghum bicolor Sb07g027650 I 0.877
Si015498m.g Setaria italica Si015498m.g I 0.880
TCM_034835 Theobroma cacao TCM_034835 I 0.910
Thhalv10019493m.g Eutrema salsugineum Thhalv10019493m.g I 0.883