CRE17354 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE17354 T302212_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.953 0.766
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.760 0.641
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE17354 Nuclear receptor 1 64

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_001_00551 Aquilegia coerulea Aquca_001_00551 N
AT3G24490 Arabidopsis thaliana AT3G24490 N
Bo3g083280 Brassica oleracea Bo3g083280 N
Bostr.19424s0179 Boechera stricta Bostr.19424s0179 N
Bra001951 Brassica rapa Bra001951 N
Ciclev10008866m.g Citrus clementina Ciclev10008866m.g N
Cla015679 Citrullus lanatus Cla015679 N
Cucsa.358990 Cucumis sativus Cucsa.358990 N
evm.TU.supercontig_23.117 Carica papaya evm.TU.supercontig_23.117 N
gene02091-v1.0-hybrid Fragaria vesca gene02091-v1.0-hybrid N
MDP0000260359 Malus domestica MDP0000260359 N
MDP0000276691 Malus domestica MDP0000276691 N
MDP0000500940 Malus domestica MDP0000500940 N
MDP0000578820 Malus domestica MDP0000578820 N
mgf024433m Mimulus guttatus mgf024433m N
PGSC0003DMG400027438 Solanum tuberosum PGSC0003DMG400027438 N
Pm013502 Prunus mume Pm013502 N
Pm027397 Prunus mume Pm027397 N
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
scaffold_302996.1 Arabidopsis lyrata scaffold_302996.1 N
Solyc05g018350.2 Solanum lycopersicum Solyc05g018350.2 N
TCM_037914 Theobroma cacao TCM_037914 N
Thhalv10002883m.g Eutrema salsugineum Thhalv10002883m.g N