CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GL12764
(
Drosophila persimilis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
FBgn0150370
T305394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.957
0.963
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.957
0.963
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.957
0.963
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN
NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.953
0.926
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.946
0.852
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.946
0.852
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.946
0.852
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.946
0.852
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.946
0.852
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.946
0.852
kni
M11189_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.946
0.852
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.938
0.852
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.938
0.852
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0176871
Nuclear receptor
32
85
QTCKVCGEPAAGFHFGAFTCEGCKNNGECIINKKNRTVGKACRLKKCLMVGMSK
Links
Other
Nuclear receptor
family TFs
Other
Drosophila persimilis
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022583
Oryza indica
BGIOSGA022583
N
HAZ1
Oryza sativa
OS06G0229300
N
LPERR01G26350
Leersia perrieri
LPERR01G26350
N
LPERR02G12330
Leersia perrieri
LPERR02G12330
N
OB01G10540
Oryza brachyantha
OB01G10540
N
OBART06G08210
Oryza barthii
OBART06G08210
N
OGLUM06G08790
Oryza glumaepatula
OGLUM06G08790
N
OLONG_012955
Oryza longistaminata
OLONG_012955
N
OMERI06G09800
Oryza meridionalis
OMERI06G09800
N
ONIVA06G09490
Oryza nivara
ONIVA06G09490
N
OPUNC06G07980
Oryza punctata
OPUNC06G07980
N
ORUFI06G08550
Oryza rufipogon
ORUFI06G08550
N
Pavir.Ea02883
Panicum virgatum
Pavir.Ea02883
N